Gene : Lsat_1_v5_gn_5_70020 L. sativa V8
Defline:  (1 of 19) PTHR12549//PTHR12549:SF16 - JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN // HISTONE H3MK9 DEMETHYLASE Genomic Order:  1840
Name:  ? Lsat_1_v5_gn_5_70020 Secondary Identifier:  ? PAC:38969359
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_70020 0.5kb upstream 0.5kb upstream 7748   true Lsat_1_v8_lg_5: 160226230-160233977 Lactuca sativa
Lsat_1_v5_gn_5_70020 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 160226230-160226729 Lactuca sativa
Lsat_1_v5_gn_5_70020 0.5kb downstream 0.5kb downstream 7748   true Lsat_1_v8_lg_5: 160226730-160234477 Lactuca sativa
Lsat_1_v5_gn_5_70020 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 160233978-160234477 Lactuca sativa
Lsat_1_v5_gn_5_70020 1.0kb upstream 1.0kb upstream 8248   true Lsat_1_v8_lg_5: 160225730-160233977 Lactuca sativa
Lsat_1_v5_gn_5_70020 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 160225730-160226729 Lactuca sativa
Lsat_1_v5_gn_5_70020 1.0kb downstream 1.0kb downstream 8248   true Lsat_1_v8_lg_5: 160226730-160234977 Lactuca sativa
Lsat_1_v5_gn_5_70020 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 160233978-160234977 Lactuca sativa
Lsat_1_v5_gn_5_70020 2.0kb upstream 2.0kb upstream 9248   true Lsat_1_v8_lg_5: 160224730-160233977 Lactuca sativa
Lsat_1_v5_gn_5_70020 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 160224730-160226729 Lactuca sativa
Lsat_1_v5_gn_5_70020 2.0kb downstream 2.0kb downstream 9248   true Lsat_1_v8_lg_5: 160226730-160235977 Lactuca sativa
Lsat_1_v5_gn_5_70020 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 160233978-160235977 Lactuca sativa
Lsat_1_v5_gn_5_70020 5.0kb upstream 5.0kb upstream 12248   true Lsat_1_v8_lg_5: 160221730-160233977 Lactuca sativa
Lsat_1_v5_gn_5_70020 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 160221730-160226729 Lactuca sativa
Lsat_1_v5_gn_5_70020 5.0kb downstream 5.0kb downstream 12248   true Lsat_1_v8_lg_5: 160226730-160238977 Lactuca sativa
Lsat_1_v5_gn_5_70020 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 160233978-160238977 Lactuca sativa
Lsat_1_v5_gn_5_70020 10.0kb upstream 10.0kb upstream 17248   true Lsat_1_v8_lg_5: 160216730-160233977 Lactuca sativa
Lsat_1_v5_gn_5_70020 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 160216730-160226729 Lactuca sativa
Lsat_1_v5_gn_5_70020 10.0kb downstream 10.0kb downstream 17248   true Lsat_1_v8_lg_5: 160226730-160243977 Lactuca sativa
Lsat_1_v5_gn_5_70020 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 160233978-160243977 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480798 5263 Asterids View MSA
123747808 5271 Pentapetalae View MSA
122796242 5272 Eudicot View MSA
122050393 5273 Angiosperm View MSA
121349542 5274 Embryophyte View MSA
123425923 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain