Gene : Lsat_1_v5_gn_5_77661 L. sativa V8
Defline:  (1 of 1) PTHR23409//PTHR23409:SF24 - RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN // RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN A Genomic Order:  2030
Name:  ? Lsat_1_v5_gn_5_77661 Secondary Identifier:  ? PAC:38965968
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Sequence Feature Displayer

Ontology Annotation Displayer

11 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-6126 Lactuca sativa pathologic  
Lsativa PWY-7184 Lactuca sativa pathologic  
Lsativa PWY-7210 Lactuca sativa pathologic  
Lsativa PWY-7211 Lactuca sativa pathologic  
Lsativa PWY-7220 Lactuca sativa pathologic  
Lsativa PWY-7222 Lactuca sativa pathologic  
Lsativa PWY-7226 Lactuca sativa pathologic  
Lsativa PWY-7227 Lactuca sativa pathologic  
Lsativa PWY-7228 Lactuca sativa pathologic  
Lsativa PWY-7229 Lactuca sativa pathologic  
Lsativa PWY-841 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_77661 0.5kb upstream 0.5kb upstream 4421   true Lsat_1_v8_lg_5: 174878678-174883098 Lactuca sativa
Lsat_1_v5_gn_5_77661 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 174882599-174883098 Lactuca sativa
Lsat_1_v5_gn_5_77661 0.5kb downstream 0.5kb downstream 4421   true Lsat_1_v8_lg_5: 174878178-174882598 Lactuca sativa
Lsat_1_v5_gn_5_77661 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 174878178-174878677 Lactuca sativa
Lsat_1_v5_gn_5_77661 1.0kb upstream 1.0kb upstream 4921   true Lsat_1_v8_lg_5: 174878678-174883598 Lactuca sativa
Lsat_1_v5_gn_5_77661 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 174882599-174883598 Lactuca sativa
Lsat_1_v5_gn_5_77661 1.0kb downstream 1.0kb downstream 4921   true Lsat_1_v8_lg_5: 174877678-174882598 Lactuca sativa
Lsat_1_v5_gn_5_77661 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 174877678-174878677 Lactuca sativa
Lsat_1_v5_gn_5_77661 2.0kb upstream 2.0kb upstream 5921   true Lsat_1_v8_lg_5: 174878678-174884598 Lactuca sativa
Lsat_1_v5_gn_5_77661 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 174882599-174884598 Lactuca sativa
Lsat_1_v5_gn_5_77661 2.0kb downstream 2.0kb downstream 5921   true Lsat_1_v8_lg_5: 174876678-174882598 Lactuca sativa
Lsat_1_v5_gn_5_77661 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 174876678-174878677 Lactuca sativa
Lsat_1_v5_gn_5_77661 5.0kb upstream 5.0kb upstream 8921   true Lsat_1_v8_lg_5: 174878678-174887598 Lactuca sativa
Lsat_1_v5_gn_5_77661 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 174882599-174887598 Lactuca sativa
Lsat_1_v5_gn_5_77661 5.0kb downstream 5.0kb downstream 8921   true Lsat_1_v8_lg_5: 174873678-174882598 Lactuca sativa
Lsat_1_v5_gn_5_77661 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 174873678-174878677 Lactuca sativa
Lsat_1_v5_gn_5_77661 10.0kb upstream 10.0kb upstream 13921   true Lsat_1_v8_lg_5: 174878678-174892598 Lactuca sativa
Lsat_1_v5_gn_5_77661 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 174882599-174892598 Lactuca sativa
Lsat_1_v5_gn_5_77661 10.0kb downstream 10.0kb downstream 13921   true Lsat_1_v8_lg_5: 174868678-174882598 Lactuca sativa
Lsat_1_v5_gn_5_77661 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 174868678-174878677 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471223 5263 Asterids View MSA
123738925 5271 Pentapetalae View MSA
122769936 5272 Eudicot View MSA
122044318 5273 Angiosperm View MSA
121310276 5274 Embryophyte View MSA
123428543 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain