Gene : Lsat_1_v5_gn_6_22441 L. sativa V8
Defline:  (1 of 1) PTHR12169//PTHR12169:SF5 - ATPASE N2B // AFG1-LIKE ATPASE FAMILY PROTEIN Genomic Order:  672
Name:  ? Lsat_1_v5_gn_6_22441 Secondary Identifier:  ? PAC:38941913
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_22441 0.5kb upstream 0.5kb upstream 5428   true Lsat_1_v8_lg_6: 28241854-28247281 Lactuca sativa
Lsat_1_v5_gn_6_22441 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 28241854-28242353 Lactuca sativa
Lsat_1_v5_gn_6_22441 0.5kb downstream 0.5kb downstream 5428   true Lsat_1_v8_lg_6: 28242354-28247781 Lactuca sativa
Lsat_1_v5_gn_6_22441 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 28247282-28247781 Lactuca sativa
Lsat_1_v5_gn_6_22441 1.0kb upstream 1.0kb upstream 5928   true Lsat_1_v8_lg_6: 28241354-28247281 Lactuca sativa
Lsat_1_v5_gn_6_22441 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 28241354-28242353 Lactuca sativa
Lsat_1_v5_gn_6_22441 1.0kb downstream 1.0kb downstream 5928   true Lsat_1_v8_lg_6: 28242354-28248281 Lactuca sativa
Lsat_1_v5_gn_6_22441 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 28247282-28248281 Lactuca sativa
Lsat_1_v5_gn_6_22441 2.0kb upstream 2.0kb upstream 6928   true Lsat_1_v8_lg_6: 28240354-28247281 Lactuca sativa
Lsat_1_v5_gn_6_22441 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 28240354-28242353 Lactuca sativa
Lsat_1_v5_gn_6_22441 2.0kb downstream 2.0kb downstream 6928   true Lsat_1_v8_lg_6: 28242354-28249281 Lactuca sativa
Lsat_1_v5_gn_6_22441 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 28247282-28249281 Lactuca sativa
Lsat_1_v5_gn_6_22441 5.0kb upstream 5.0kb upstream 9928   true Lsat_1_v8_lg_6: 28237354-28247281 Lactuca sativa
Lsat_1_v5_gn_6_22441 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 28237354-28242353 Lactuca sativa
Lsat_1_v5_gn_6_22441 5.0kb downstream 5.0kb downstream 9928   true Lsat_1_v8_lg_6: 28242354-28252281 Lactuca sativa
Lsat_1_v5_gn_6_22441 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 28247282-28252281 Lactuca sativa
Lsat_1_v5_gn_6_22441 10.0kb upstream 10.0kb upstream 14928   true Lsat_1_v8_lg_6: 28232354-28247281 Lactuca sativa
Lsat_1_v5_gn_6_22441 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 28232354-28242353 Lactuca sativa
Lsat_1_v5_gn_6_22441 10.0kb downstream 10.0kb downstream 14928   true Lsat_1_v8_lg_6: 28242354-28257281 Lactuca sativa
Lsat_1_v5_gn_6_22441 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 28247282-28257281 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471614 5263 Asterids View MSA
123741910 5271 Pentapetalae View MSA
122794627 5272 Eudicot View MSA
122048281 5273 Angiosperm View MSA
121348170 5274 Embryophyte View MSA
123427307 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain