Gene : Lsat_1_v5_gn_6_10640 L. sativa V8
Defline:  (1 of 1) K04569 - copper chaperone for superoxide dismutase (CCS) Genomic Order:  326
Name:  ? Lsat_1_v5_gn_6_10640 Secondary Identifier:  ? PAC:38937868
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_10640 0.5kb upstream 0.5kb upstream 2630   true Lsat_1_v8_lg_6: 14625788-14628417 Lactuca sativa
Lsat_1_v5_gn_6_10640 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 14627918-14628417 Lactuca sativa
Lsat_1_v5_gn_6_10640 0.5kb downstream 0.5kb downstream 2630   true Lsat_1_v8_lg_6: 14625288-14627917 Lactuca sativa
Lsat_1_v5_gn_6_10640 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 14625288-14625787 Lactuca sativa
Lsat_1_v5_gn_6_10640 1.0kb upstream 1.0kb upstream 3130   true Lsat_1_v8_lg_6: 14625788-14628917 Lactuca sativa
Lsat_1_v5_gn_6_10640 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 14627918-14628917 Lactuca sativa
Lsat_1_v5_gn_6_10640 1.0kb downstream 1.0kb downstream 3130   true Lsat_1_v8_lg_6: 14624788-14627917 Lactuca sativa
Lsat_1_v5_gn_6_10640 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 14624788-14625787 Lactuca sativa
Lsat_1_v5_gn_6_10640 2.0kb upstream 2.0kb upstream 4130   true Lsat_1_v8_lg_6: 14625788-14629917 Lactuca sativa
Lsat_1_v5_gn_6_10640 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 14627918-14629917 Lactuca sativa
Lsat_1_v5_gn_6_10640 2.0kb downstream 2.0kb downstream 4130   true Lsat_1_v8_lg_6: 14623788-14627917 Lactuca sativa
Lsat_1_v5_gn_6_10640 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 14623788-14625787 Lactuca sativa
Lsat_1_v5_gn_6_10640 5.0kb upstream 5.0kb upstream 7130   true Lsat_1_v8_lg_6: 14625788-14632917 Lactuca sativa
Lsat_1_v5_gn_6_10640 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 14627918-14632917 Lactuca sativa
Lsat_1_v5_gn_6_10640 5.0kb downstream 5.0kb downstream 7130   true Lsat_1_v8_lg_6: 14620788-14627917 Lactuca sativa
Lsat_1_v5_gn_6_10640 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 14620788-14625787 Lactuca sativa
Lsat_1_v5_gn_6_10640 10.0kb upstream 10.0kb upstream 12130   true Lsat_1_v8_lg_6: 14625788-14637917 Lactuca sativa
Lsat_1_v5_gn_6_10640 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 14627918-14637917 Lactuca sativa
Lsat_1_v5_gn_6_10640 10.0kb downstream 10.0kb downstream 12130   true Lsat_1_v8_lg_6: 14615788-14627917 Lactuca sativa
Lsat_1_v5_gn_6_10640 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 14615788-14625787 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471454 5263 Asterids View MSA
123739046 5271 Pentapetalae View MSA
122793199 5272 Eudicot View MSA
122046170 5273 Angiosperm View MSA
121346754 5274 Embryophyte View MSA
123425336 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain