Gene : Lsat_1_v5_gn_6_11100 L. sativa V8
Defline:  (1 of 1) PTHR11649//PTHR11649:SF49//PTHR21677//PTHR21677:SF3 - MSS1/TRME-RELATED GTP-BINDING PROTEIN // SUBFAMILY NOT NAMED // CRAMPED PROTEIN // TSL-KINASE INTERACTING PROTEIN 1 Genomic Order:  345
Name:  ? Lsat_1_v5_gn_6_11100 Secondary Identifier:  ? PAC:38936600
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_11100 0.5kb upstream 0.5kb upstream 13029   true Lsat_1_v8_lg_6: 15020371-15033399 Lactuca sativa
Lsat_1_v5_gn_6_11100 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 15020371-15020870 Lactuca sativa
Lsat_1_v5_gn_6_11100 0.5kb downstream 0.5kb downstream 13029   true Lsat_1_v8_lg_6: 15020871-15033899 Lactuca sativa
Lsat_1_v5_gn_6_11100 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 15033400-15033899 Lactuca sativa
Lsat_1_v5_gn_6_11100 1.0kb upstream 1.0kb upstream 13529   true Lsat_1_v8_lg_6: 15019871-15033399 Lactuca sativa
Lsat_1_v5_gn_6_11100 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 15019871-15020870 Lactuca sativa
Lsat_1_v5_gn_6_11100 1.0kb downstream 1.0kb downstream 13529   true Lsat_1_v8_lg_6: 15020871-15034399 Lactuca sativa
Lsat_1_v5_gn_6_11100 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 15033400-15034399 Lactuca sativa
Lsat_1_v5_gn_6_11100 2.0kb upstream 2.0kb upstream 14529   true Lsat_1_v8_lg_6: 15018871-15033399 Lactuca sativa
Lsat_1_v5_gn_6_11100 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 15018871-15020870 Lactuca sativa
Lsat_1_v5_gn_6_11100 2.0kb downstream 2.0kb downstream 14529   true Lsat_1_v8_lg_6: 15020871-15035399 Lactuca sativa
Lsat_1_v5_gn_6_11100 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 15033400-15035399 Lactuca sativa
Lsat_1_v5_gn_6_11100 5.0kb upstream 5.0kb upstream 17529   true Lsat_1_v8_lg_6: 15015871-15033399 Lactuca sativa
Lsat_1_v5_gn_6_11100 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 15015871-15020870 Lactuca sativa
Lsat_1_v5_gn_6_11100 5.0kb downstream 5.0kb downstream 17529   true Lsat_1_v8_lg_6: 15020871-15038399 Lactuca sativa
Lsat_1_v5_gn_6_11100 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 15033400-15038399 Lactuca sativa
Lsat_1_v5_gn_6_11100 10.0kb upstream 10.0kb upstream 22529   true Lsat_1_v8_lg_6: 15010871-15033399 Lactuca sativa
Lsat_1_v5_gn_6_11100 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 15010871-15020870 Lactuca sativa
Lsat_1_v5_gn_6_11100 10.0kb downstream 10.0kb downstream 22529   true Lsat_1_v8_lg_6: 15020871-15043399 Lactuca sativa
Lsat_1_v5_gn_6_11100 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 15033400-15043399 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471487 5263 Asterids View MSA
123739065 5271 Pentapetalae View MSA
122788793 5272 Eudicot View MSA
122045956 5273 Angiosperm View MSA
121345764 5274 Embryophyte View MSA
123427955 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain