Gene : Lsat_1_v5_gn_6_110841 L. sativa V8
Defline:  (1 of 2) PTHR23315//PTHR23315:SF64 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // ARM REPEAT SUPERFAMILY PROTEIN-RELATED Genomic Order:  3205
Name:  ? Lsat_1_v5_gn_6_110841 Secondary Identifier:  ? PAC:38937109
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-7511 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_110841 0.5kb upstream 0.5kb upstream 2480   true Lsat_1_v8_lg_6: 182611773-182614252 Lactuca sativa
Lsat_1_v5_gn_6_110841 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 182611773-182612272 Lactuca sativa
Lsat_1_v5_gn_6_110841 0.5kb downstream 0.5kb downstream 2480   true Lsat_1_v8_lg_6: 182612273-182614752 Lactuca sativa
Lsat_1_v5_gn_6_110841 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 182614253-182614752 Lactuca sativa
Lsat_1_v5_gn_6_110841 1.0kb upstream 1.0kb upstream 2980   true Lsat_1_v8_lg_6: 182611273-182614252 Lactuca sativa
Lsat_1_v5_gn_6_110841 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 182611273-182612272 Lactuca sativa
Lsat_1_v5_gn_6_110841 1.0kb downstream 1.0kb downstream 2980   true Lsat_1_v8_lg_6: 182612273-182615252 Lactuca sativa
Lsat_1_v5_gn_6_110841 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 182614253-182615252 Lactuca sativa
Lsat_1_v5_gn_6_110841 2.0kb upstream 2.0kb upstream 3980   true Lsat_1_v8_lg_6: 182610273-182614252 Lactuca sativa
Lsat_1_v5_gn_6_110841 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 182610273-182612272 Lactuca sativa
Lsat_1_v5_gn_6_110841 2.0kb downstream 2.0kb downstream 3980   true Lsat_1_v8_lg_6: 182612273-182616252 Lactuca sativa
Lsat_1_v5_gn_6_110841 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 182614253-182616252 Lactuca sativa
Lsat_1_v5_gn_6_110841 5.0kb upstream 5.0kb upstream 6980   true Lsat_1_v8_lg_6: 182607273-182614252 Lactuca sativa
Lsat_1_v5_gn_6_110841 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 182607273-182612272 Lactuca sativa
Lsat_1_v5_gn_6_110841 5.0kb downstream 5.0kb downstream 6980   true Lsat_1_v8_lg_6: 182612273-182619252 Lactuca sativa
Lsat_1_v5_gn_6_110841 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 182614253-182619252 Lactuca sativa
Lsat_1_v5_gn_6_110841 10.0kb upstream 10.0kb upstream 11980   true Lsat_1_v8_lg_6: 182602273-182614252 Lactuca sativa
Lsat_1_v5_gn_6_110841 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 182602273-182612272 Lactuca sativa
Lsat_1_v5_gn_6_110841 10.0kb downstream 10.0kb downstream 11980   true Lsat_1_v8_lg_6: 182612273-182624252 Lactuca sativa
Lsat_1_v5_gn_6_110841 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 182614253-182624252 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469498 5263 Asterids View MSA
123738053 5271 Pentapetalae View MSA
122796694 5272 Eudicot View MSA
122047574 5273 Angiosperm View MSA
121350406 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain