Gene : Lsat_1_v5_gn_6_111621 L. sativa V8
Defline:  (1 of 1) PTHR11945:SF187 - FLORAL HOMEOTIC PROTEIN AGAMOUS Genomic Order:  3227
Name:  ? Lsat_1_v5_gn_6_111621 Secondary Identifier:  ? PAC:38939804
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_111621 0.5kb upstream 0.5kb upstream 9734   true Lsat_1_v8_lg_6: 183984166-183993899 Lactuca sativa
Lsat_1_v5_gn_6_111621 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 183984166-183984665 Lactuca sativa
Lsat_1_v5_gn_6_111621 0.5kb downstream 0.5kb downstream 9734   true Lsat_1_v8_lg_6: 183984666-183994399 Lactuca sativa
Lsat_1_v5_gn_6_111621 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 183993900-183994399 Lactuca sativa
Lsat_1_v5_gn_6_111621 1.0kb upstream 1.0kb upstream 10234   true Lsat_1_v8_lg_6: 183983666-183993899 Lactuca sativa
Lsat_1_v5_gn_6_111621 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 183983666-183984665 Lactuca sativa
Lsat_1_v5_gn_6_111621 1.0kb downstream 1.0kb downstream 10234   true Lsat_1_v8_lg_6: 183984666-183994899 Lactuca sativa
Lsat_1_v5_gn_6_111621 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 183993900-183994899 Lactuca sativa
Lsat_1_v5_gn_6_111621 2.0kb upstream 2.0kb upstream 11234   true Lsat_1_v8_lg_6: 183982666-183993899 Lactuca sativa
Lsat_1_v5_gn_6_111621 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 183982666-183984665 Lactuca sativa
Lsat_1_v5_gn_6_111621 2.0kb downstream 2.0kb downstream 11234   true Lsat_1_v8_lg_6: 183984666-183995899 Lactuca sativa
Lsat_1_v5_gn_6_111621 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 183993900-183995899 Lactuca sativa
Lsat_1_v5_gn_6_111621 5.0kb upstream 5.0kb upstream 14234   true Lsat_1_v8_lg_6: 183979666-183993899 Lactuca sativa
Lsat_1_v5_gn_6_111621 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 183979666-183984665 Lactuca sativa
Lsat_1_v5_gn_6_111621 5.0kb downstream 5.0kb downstream 14234   true Lsat_1_v8_lg_6: 183984666-183998899 Lactuca sativa
Lsat_1_v5_gn_6_111621 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 183993900-183998899 Lactuca sativa
Lsat_1_v5_gn_6_111621 10.0kb upstream 10.0kb upstream 19234   true Lsat_1_v8_lg_6: 183974666-183993899 Lactuca sativa
Lsat_1_v5_gn_6_111621 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 183974666-183984665 Lactuca sativa
Lsat_1_v5_gn_6_111621 10.0kb downstream 10.0kb downstream 19234   true Lsat_1_v8_lg_6: 183984666-184003899 Lactuca sativa
Lsat_1_v5_gn_6_111621 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 183993900-184003899 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474448 5263 Asterids View MSA
123747867 5271 Pentapetalae View MSA
122793842 5272 Eudicot View MSA
122049629 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain