Gene : Lsat_1_v5_gn_6_46081 L. sativa V8
Defline:  (1 of 1) 2.1.1.35 - tRNA (uracil(54)-C(5))-methyltransferase / tRNA:m(5)U(54)-methyltransferase Genomic Order:  1399
Name:  ? Lsat_1_v5_gn_6_46081 Secondary Identifier:  ? PAC:38937816
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_46081 0.5kb upstream 0.5kb upstream 4274   true Lsat_1_v8_lg_6: 62255959-62260232 Lactuca sativa
Lsat_1_v5_gn_6_46081 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 62259733-62260232 Lactuca sativa
Lsat_1_v5_gn_6_46081 0.5kb downstream 0.5kb downstream 4274   true Lsat_1_v8_lg_6: 62255459-62259732 Lactuca sativa
Lsat_1_v5_gn_6_46081 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 62255459-62255958 Lactuca sativa
Lsat_1_v5_gn_6_46081 1.0kb upstream 1.0kb upstream 4774   true Lsat_1_v8_lg_6: 62255959-62260732 Lactuca sativa
Lsat_1_v5_gn_6_46081 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 62259733-62260732 Lactuca sativa
Lsat_1_v5_gn_6_46081 1.0kb downstream 1.0kb downstream 4774   true Lsat_1_v8_lg_6: 62254959-62259732 Lactuca sativa
Lsat_1_v5_gn_6_46081 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 62254959-62255958 Lactuca sativa
Lsat_1_v5_gn_6_46081 2.0kb upstream 2.0kb upstream 5774   true Lsat_1_v8_lg_6: 62255959-62261732 Lactuca sativa
Lsat_1_v5_gn_6_46081 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 62259733-62261732 Lactuca sativa
Lsat_1_v5_gn_6_46081 2.0kb downstream 2.0kb downstream 5774   true Lsat_1_v8_lg_6: 62253959-62259732 Lactuca sativa
Lsat_1_v5_gn_6_46081 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 62253959-62255958 Lactuca sativa
Lsat_1_v5_gn_6_46081 5.0kb upstream 5.0kb upstream 8774   true Lsat_1_v8_lg_6: 62255959-62264732 Lactuca sativa
Lsat_1_v5_gn_6_46081 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 62259733-62264732 Lactuca sativa
Lsat_1_v5_gn_6_46081 5.0kb downstream 5.0kb downstream 8774   true Lsat_1_v8_lg_6: 62250959-62259732 Lactuca sativa
Lsat_1_v5_gn_6_46081 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 62250959-62255958 Lactuca sativa
Lsat_1_v5_gn_6_46081 10.0kb upstream 10.0kb upstream 13774   true Lsat_1_v8_lg_6: 62255959-62269732 Lactuca sativa
Lsat_1_v5_gn_6_46081 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 62259733-62269732 Lactuca sativa
Lsat_1_v5_gn_6_46081 10.0kb downstream 10.0kb downstream 13774   true Lsat_1_v8_lg_6: 62245959-62259732 Lactuca sativa
Lsat_1_v5_gn_6_46081 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 62245959-62255958 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041225 5273 Angiosperm View MSA
121468374 5263 Asterids View MSA
123737485 5271 Pentapetalae View MSA
122787595 5272 Eudicot View MSA
121344399 5274 Embryophyte View MSA
123425601 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain