Gene : Lsat_1_v5_gn_6_54841 L. sativa V8
Defline:  (1 of 1) PTHR13020//PTHR13020:SF36 - UBIQUITIN-ASSOCIATED UBA/UBX DOMAIN-CONTAINING // EXPRESSED PROTEIN Genomic Order:  1693
Name:  ? Lsat_1_v5_gn_6_54841 Secondary Identifier:  ? PAC:38936711
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_54841 0.5kb upstream 0.5kb upstream 3962   true Lsat_1_v8_lg_6: 79266436-79270397 Lactuca sativa
Lsat_1_v5_gn_6_54841 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 79269898-79270397 Lactuca sativa
Lsat_1_v5_gn_6_54841 0.5kb downstream 0.5kb downstream 3962   true Lsat_1_v8_lg_6: 79265936-79269897 Lactuca sativa
Lsat_1_v5_gn_6_54841 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 79265936-79266435 Lactuca sativa
Lsat_1_v5_gn_6_54841 1.0kb upstream 1.0kb upstream 4462   true Lsat_1_v8_lg_6: 79266436-79270897 Lactuca sativa
Lsat_1_v5_gn_6_54841 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 79269898-79270897 Lactuca sativa
Lsat_1_v5_gn_6_54841 1.0kb downstream 1.0kb downstream 4462   true Lsat_1_v8_lg_6: 79265436-79269897 Lactuca sativa
Lsat_1_v5_gn_6_54841 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 79265436-79266435 Lactuca sativa
Lsat_1_v5_gn_6_54841 2.0kb upstream 2.0kb upstream 5462   true Lsat_1_v8_lg_6: 79266436-79271897 Lactuca sativa
Lsat_1_v5_gn_6_54841 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 79269898-79271897 Lactuca sativa
Lsat_1_v5_gn_6_54841 2.0kb downstream 2.0kb downstream 5462   true Lsat_1_v8_lg_6: 79264436-79269897 Lactuca sativa
Lsat_1_v5_gn_6_54841 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 79264436-79266435 Lactuca sativa
Lsat_1_v5_gn_6_54841 5.0kb upstream 5.0kb upstream 8462   true Lsat_1_v8_lg_6: 79266436-79274897 Lactuca sativa
Lsat_1_v5_gn_6_54841 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 79269898-79274897 Lactuca sativa
Lsat_1_v5_gn_6_54841 5.0kb downstream 5.0kb downstream 8462   true Lsat_1_v8_lg_6: 79261436-79269897 Lactuca sativa
Lsat_1_v5_gn_6_54841 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 79261436-79266435 Lactuca sativa
Lsat_1_v5_gn_6_54841 10.0kb upstream 10.0kb upstream 13462   true Lsat_1_v8_lg_6: 79266436-79279897 Lactuca sativa
Lsat_1_v5_gn_6_54841 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 79269898-79279897 Lactuca sativa
Lsat_1_v5_gn_6_54841 10.0kb downstream 10.0kb downstream 13462   true Lsat_1_v8_lg_6: 79256436-79269897 Lactuca sativa
Lsat_1_v5_gn_6_54841 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 79256436-79266435 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470403 5263 Asterids View MSA
123746663 5271 Pentapetalae View MSA
122772002 5272 Eudicot View MSA
122046799 5273 Angiosperm View MSA
121344006 5274 Embryophyte View MSA
123425372 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain