Gene : Lsat_1_v5_gn_6_54400 L. sativa V8
Defline:  (1 of 2) PTHR27002//PTHR27002:SF42 - FAMILY NOT NAMED // G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD3-1 Genomic Order:  1600
Name:  ? Lsat_1_v5_gn_6_54400 Secondary Identifier:  ? PAC:38941533
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_54400 0.5kb upstream 0.5kb upstream 2789   true Lsat_1_v8_lg_6: 74579079-74581867 Lactuca sativa
Lsat_1_v5_gn_6_54400 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 74579079-74579578 Lactuca sativa
Lsat_1_v5_gn_6_54400 0.5kb downstream 0.5kb downstream 2789   true Lsat_1_v8_lg_6: 74579579-74582367 Lactuca sativa
Lsat_1_v5_gn_6_54400 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 74581868-74582367 Lactuca sativa
Lsat_1_v5_gn_6_54400 1.0kb upstream 1.0kb upstream 3289   true Lsat_1_v8_lg_6: 74578579-74581867 Lactuca sativa
Lsat_1_v5_gn_6_54400 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 74578579-74579578 Lactuca sativa
Lsat_1_v5_gn_6_54400 1.0kb downstream 1.0kb downstream 3289   true Lsat_1_v8_lg_6: 74579579-74582867 Lactuca sativa
Lsat_1_v5_gn_6_54400 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 74581868-74582867 Lactuca sativa
Lsat_1_v5_gn_6_54400 2.0kb upstream 2.0kb upstream 4289   true Lsat_1_v8_lg_6: 74577579-74581867 Lactuca sativa
Lsat_1_v5_gn_6_54400 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 74577579-74579578 Lactuca sativa
Lsat_1_v5_gn_6_54400 2.0kb downstream 2.0kb downstream 4289   true Lsat_1_v8_lg_6: 74579579-74583867 Lactuca sativa
Lsat_1_v5_gn_6_54400 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 74581868-74583867 Lactuca sativa
Lsat_1_v5_gn_6_54400 5.0kb upstream 5.0kb upstream 7289   true Lsat_1_v8_lg_6: 74574579-74581867 Lactuca sativa
Lsat_1_v5_gn_6_54400 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 74574579-74579578 Lactuca sativa
Lsat_1_v5_gn_6_54400 5.0kb downstream 5.0kb downstream 7289   true Lsat_1_v8_lg_6: 74579579-74586867 Lactuca sativa
Lsat_1_v5_gn_6_54400 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 74581868-74586867 Lactuca sativa
Lsat_1_v5_gn_6_54400 10.0kb upstream 10.0kb upstream 12289   true Lsat_1_v8_lg_6: 74569579-74581867 Lactuca sativa
Lsat_1_v5_gn_6_54400 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 74569579-74579578 Lactuca sativa
Lsat_1_v5_gn_6_54400 10.0kb downstream 10.0kb downstream 12289   true Lsat_1_v8_lg_6: 74579579-74591867 Lactuca sativa
Lsat_1_v5_gn_6_54400 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 74581868-74591867 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478262 5263 Asterids View MSA
123738478 5271 Pentapetalae View MSA
122790602 5272 Eudicot View MSA
122050029 5273 Angiosperm View MSA
121311695 5274 Embryophyte View MSA
123348958 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain