Gene : Lsat_1_v5_gn_6_61660 L. sativa V8
Defline:  (1 of 1) 1.17.7.2 - 7-hydroxymethyl chlorophyll a reductase Genomic Order:  1888
Name:  ? Lsat_1_v5_gn_6_61660 Secondary Identifier:  ? PAC:38939027
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-5068 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_61660 0.5kb upstream 0.5kb upstream 14922   true Lsat_1_v8_lg_6: 94063403-94078324 Lactuca sativa
Lsat_1_v5_gn_6_61660 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 94063403-94063902 Lactuca sativa
Lsat_1_v5_gn_6_61660 0.5kb downstream 0.5kb downstream 14922   true Lsat_1_v8_lg_6: 94063903-94078824 Lactuca sativa
Lsat_1_v5_gn_6_61660 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 94078325-94078824 Lactuca sativa
Lsat_1_v5_gn_6_61660 1.0kb upstream 1.0kb upstream 15422   true Lsat_1_v8_lg_6: 94062903-94078324 Lactuca sativa
Lsat_1_v5_gn_6_61660 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 94062903-94063902 Lactuca sativa
Lsat_1_v5_gn_6_61660 1.0kb downstream 1.0kb downstream 15422   true Lsat_1_v8_lg_6: 94063903-94079324 Lactuca sativa
Lsat_1_v5_gn_6_61660 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 94078325-94079324 Lactuca sativa
Lsat_1_v5_gn_6_61660 2.0kb upstream 2.0kb upstream 16422   true Lsat_1_v8_lg_6: 94061903-94078324 Lactuca sativa
Lsat_1_v5_gn_6_61660 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 94061903-94063902 Lactuca sativa
Lsat_1_v5_gn_6_61660 2.0kb downstream 2.0kb downstream 16422   true Lsat_1_v8_lg_6: 94063903-94080324 Lactuca sativa
Lsat_1_v5_gn_6_61660 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 94078325-94080324 Lactuca sativa
Lsat_1_v5_gn_6_61660 5.0kb upstream 5.0kb upstream 19422   true Lsat_1_v8_lg_6: 94058903-94078324 Lactuca sativa
Lsat_1_v5_gn_6_61660 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 94058903-94063902 Lactuca sativa
Lsat_1_v5_gn_6_61660 5.0kb downstream 5.0kb downstream 19422   true Lsat_1_v8_lg_6: 94063903-94083324 Lactuca sativa
Lsat_1_v5_gn_6_61660 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 94078325-94083324 Lactuca sativa
Lsat_1_v5_gn_6_61660 10.0kb upstream 10.0kb upstream 24422   true Lsat_1_v8_lg_6: 94053903-94078324 Lactuca sativa
Lsat_1_v5_gn_6_61660 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 94053903-94063902 Lactuca sativa
Lsat_1_v5_gn_6_61660 10.0kb downstream 10.0kb downstream 24422   true Lsat_1_v8_lg_6: 94063903-94088324 Lactuca sativa
Lsat_1_v5_gn_6_61660 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 94078325-94088324 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469016 5263 Asterids View MSA
123745545 5271 Pentapetalae View MSA
122786931 5272 Eudicot View MSA
122042244 5273 Angiosperm View MSA
121347616 5274 Embryophyte View MSA
123428400 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain