Gene : Lsat_1_v5_gn_6_3400 L. sativa V8
Defline:  (1 of 2) PTHR31062//PTHR31062:SF16 - FAMILY NOT NAMED // XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 29-RELATED Genomic Order:  64
Name:  ? Lsat_1_v5_gn_6_3400 Secondary Identifier:  ? PAC:38940232
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_3400 0.5kb upstream 0.5kb upstream 1792   true Lsat_1_v8_lg_6: 4012169-4013960 Lactuca sativa
Lsat_1_v5_gn_6_3400 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 4013461-4013960 Lactuca sativa
Lsat_1_v5_gn_6_3400 0.5kb downstream 0.5kb downstream 1792   true Lsat_1_v8_lg_6: 4011669-4013460 Lactuca sativa
Lsat_1_v5_gn_6_3400 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 4011669-4012168 Lactuca sativa
Lsat_1_v5_gn_6_3400 1.0kb upstream 1.0kb upstream 2292   true Lsat_1_v8_lg_6: 4012169-4014460 Lactuca sativa
Lsat_1_v5_gn_6_3400 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 4013461-4014460 Lactuca sativa
Lsat_1_v5_gn_6_3400 1.0kb downstream 1.0kb downstream 2292   true Lsat_1_v8_lg_6: 4011169-4013460 Lactuca sativa
Lsat_1_v5_gn_6_3400 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 4011169-4012168 Lactuca sativa
Lsat_1_v5_gn_6_3400 2.0kb upstream 2.0kb upstream 3292   true Lsat_1_v8_lg_6: 4012169-4015460 Lactuca sativa
Lsat_1_v5_gn_6_3400 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 4013461-4015460 Lactuca sativa
Lsat_1_v5_gn_6_3400 2.0kb downstream 2.0kb downstream 3292   true Lsat_1_v8_lg_6: 4010169-4013460 Lactuca sativa
Lsat_1_v5_gn_6_3400 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 4010169-4012168 Lactuca sativa
Lsat_1_v5_gn_6_3400 5.0kb upstream 5.0kb upstream 6292   true Lsat_1_v8_lg_6: 4012169-4018460 Lactuca sativa
Lsat_1_v5_gn_6_3400 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 4013461-4018460 Lactuca sativa
Lsat_1_v5_gn_6_3400 5.0kb downstream 5.0kb downstream 6292   true Lsat_1_v8_lg_6: 4007169-4013460 Lactuca sativa
Lsat_1_v5_gn_6_3400 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 4007169-4012168 Lactuca sativa
Lsat_1_v5_gn_6_3400 10.0kb upstream 10.0kb upstream 11292   true Lsat_1_v8_lg_6: 4012169-4023460 Lactuca sativa
Lsat_1_v5_gn_6_3400 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 4013461-4023460 Lactuca sativa
Lsat_1_v5_gn_6_3400 10.0kb downstream 10.0kb downstream 11292   true Lsat_1_v8_lg_6: 4002169-4013460 Lactuca sativa
Lsat_1_v5_gn_6_3400 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 4002169-4012168 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471455 5263 Asterids View MSA
123745319 5271 Pentapetalae View MSA
122794660 5272 Eudicot View MSA
122049542 5273 Angiosperm View MSA
121347970 5274 Embryophyte View MSA
123380694 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain