Gene : Lsat_1_v5_gn_6_37181 L. sativa V8
Defline:  (1 of 4) PTHR11615:SF116 - CASPARIAN STRIP MEMBRANE PROTEIN 1-RELATED Genomic Order:  1099
Name:  ? Lsat_1_v5_gn_6_37181 Secondary Identifier:  ? PAC:38937958
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_37181 0.5kb upstream 0.5kb upstream 1776   true Lsat_1_v8_lg_6: 49875690-49877465 Lactuca sativa
Lsat_1_v5_gn_6_37181 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 49876966-49877465 Lactuca sativa
Lsat_1_v5_gn_6_37181 0.5kb downstream 0.5kb downstream 1776   true Lsat_1_v8_lg_6: 49875190-49876965 Lactuca sativa
Lsat_1_v5_gn_6_37181 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 49875190-49875689 Lactuca sativa
Lsat_1_v5_gn_6_37181 1.0kb upstream 1.0kb upstream 2276   true Lsat_1_v8_lg_6: 49875690-49877965 Lactuca sativa
Lsat_1_v5_gn_6_37181 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 49876966-49877965 Lactuca sativa
Lsat_1_v5_gn_6_37181 1.0kb downstream 1.0kb downstream 2276   true Lsat_1_v8_lg_6: 49874690-49876965 Lactuca sativa
Lsat_1_v5_gn_6_37181 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 49874690-49875689 Lactuca sativa
Lsat_1_v5_gn_6_37181 2.0kb upstream 2.0kb upstream 3276   true Lsat_1_v8_lg_6: 49875690-49878965 Lactuca sativa
Lsat_1_v5_gn_6_37181 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 49876966-49878965 Lactuca sativa
Lsat_1_v5_gn_6_37181 2.0kb downstream 2.0kb downstream 3276   true Lsat_1_v8_lg_6: 49873690-49876965 Lactuca sativa
Lsat_1_v5_gn_6_37181 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 49873690-49875689 Lactuca sativa
Lsat_1_v5_gn_6_37181 5.0kb upstream 5.0kb upstream 6276   true Lsat_1_v8_lg_6: 49875690-49881965 Lactuca sativa
Lsat_1_v5_gn_6_37181 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 49876966-49881965 Lactuca sativa
Lsat_1_v5_gn_6_37181 5.0kb downstream 5.0kb downstream 6276   true Lsat_1_v8_lg_6: 49870690-49876965 Lactuca sativa
Lsat_1_v5_gn_6_37181 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 49870690-49875689 Lactuca sativa
Lsat_1_v5_gn_6_37181 10.0kb upstream 10.0kb upstream 11276   true Lsat_1_v8_lg_6: 49875690-49886965 Lactuca sativa
Lsat_1_v5_gn_6_37181 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 49876966-49886965 Lactuca sativa
Lsat_1_v5_gn_6_37181 10.0kb downstream 10.0kb downstream 11276   true Lsat_1_v8_lg_6: 49865690-49876965 Lactuca sativa
Lsat_1_v5_gn_6_37181 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 49865690-49875689 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481927 5263 Asterids View MSA
123746908 5271 Pentapetalae View MSA
122797470 5272 Eudicot View MSA
122046070 5273 Angiosperm View MSA
121351638 5274 Embryophyte View MSA
123382256 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain