Gene : Lsat_1_v5_gn_6_40440 L. sativa V8
Defline:  (1 of 1) PTHR10459//PTHR10459:SF54 - DNA LIGASE // POLY [ADP-RIBOSE] POLYMERASE 3 Genomic Order:  1206
Name:  ? Lsat_1_v5_gn_6_40440 Secondary Identifier:  ? PAC:38937848
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_40440 0.5kb upstream 0.5kb upstream 4263   true Lsat_1_v8_lg_6: 53865485-53869747 Lactuca sativa
Lsat_1_v5_gn_6_40440 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 53865485-53865984 Lactuca sativa
Lsat_1_v5_gn_6_40440 0.5kb downstream 0.5kb downstream 4263   true Lsat_1_v8_lg_6: 53865985-53870247 Lactuca sativa
Lsat_1_v5_gn_6_40440 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 53869748-53870247 Lactuca sativa
Lsat_1_v5_gn_6_40440 1.0kb upstream 1.0kb upstream 4763   true Lsat_1_v8_lg_6: 53864985-53869747 Lactuca sativa
Lsat_1_v5_gn_6_40440 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 53864985-53865984 Lactuca sativa
Lsat_1_v5_gn_6_40440 1.0kb downstream 1.0kb downstream 4763   true Lsat_1_v8_lg_6: 53865985-53870747 Lactuca sativa
Lsat_1_v5_gn_6_40440 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 53869748-53870747 Lactuca sativa
Lsat_1_v5_gn_6_40440 2.0kb upstream 2.0kb upstream 5763   true Lsat_1_v8_lg_6: 53863985-53869747 Lactuca sativa
Lsat_1_v5_gn_6_40440 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 53863985-53865984 Lactuca sativa
Lsat_1_v5_gn_6_40440 2.0kb downstream 2.0kb downstream 5763   true Lsat_1_v8_lg_6: 53865985-53871747 Lactuca sativa
Lsat_1_v5_gn_6_40440 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 53869748-53871747 Lactuca sativa
Lsat_1_v5_gn_6_40440 5.0kb upstream 5.0kb upstream 8763   true Lsat_1_v8_lg_6: 53860985-53869747 Lactuca sativa
Lsat_1_v5_gn_6_40440 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 53860985-53865984 Lactuca sativa
Lsat_1_v5_gn_6_40440 5.0kb downstream 5.0kb downstream 8763   true Lsat_1_v8_lg_6: 53865985-53874747 Lactuca sativa
Lsat_1_v5_gn_6_40440 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 53869748-53874747 Lactuca sativa
Lsat_1_v5_gn_6_40440 10.0kb upstream 10.0kb upstream 13763   true Lsat_1_v8_lg_6: 53855985-53869747 Lactuca sativa
Lsat_1_v5_gn_6_40440 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 53855985-53865984 Lactuca sativa
Lsat_1_v5_gn_6_40440 10.0kb downstream 10.0kb downstream 13763   true Lsat_1_v8_lg_6: 53865985-53879747 Lactuca sativa
Lsat_1_v5_gn_6_40440 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 53869748-53879747 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026518 5273 Angiosperm View MSA
121479997 5263 Asterids View MSA
123738143 5271 Pentapetalae View MSA
122786471 5272 Eudicot View MSA
121348135 5274 Embryophyte View MSA
123380738 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain