Gene : Lsat_1_v5_gn_6_86121 L. sativa V8
Defline:  (1 of 25) PF00069//PF00560//PF08263 - Protein kinase domain (Pkinase) // Leucine Rich Repeat (LRR_1) // Leucine rich repeat N-terminal domain (LRRNT_2) Genomic Order:  2461
Name:  ? Lsat_1_v5_gn_6_86121 Secondary Identifier:  ? PAC:38938809
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_86121 0.5kb upstream 0.5kb upstream 3771   true Lsat_1_v8_lg_6: 140903662-140907432 Lactuca sativa
Lsat_1_v5_gn_6_86121 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 140906933-140907432 Lactuca sativa
Lsat_1_v5_gn_6_86121 0.5kb downstream 0.5kb downstream 3771   true Lsat_1_v8_lg_6: 140903162-140906932 Lactuca sativa
Lsat_1_v5_gn_6_86121 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 140903162-140903661 Lactuca sativa
Lsat_1_v5_gn_6_86121 1.0kb upstream 1.0kb upstream 4271   true Lsat_1_v8_lg_6: 140903662-140907932 Lactuca sativa
Lsat_1_v5_gn_6_86121 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 140906933-140907932 Lactuca sativa
Lsat_1_v5_gn_6_86121 1.0kb downstream 1.0kb downstream 4271   true Lsat_1_v8_lg_6: 140902662-140906932 Lactuca sativa
Lsat_1_v5_gn_6_86121 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 140902662-140903661 Lactuca sativa
Lsat_1_v5_gn_6_86121 2.0kb upstream 2.0kb upstream 5271   true Lsat_1_v8_lg_6: 140903662-140908932 Lactuca sativa
Lsat_1_v5_gn_6_86121 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 140906933-140908932 Lactuca sativa
Lsat_1_v5_gn_6_86121 2.0kb downstream 2.0kb downstream 5271   true Lsat_1_v8_lg_6: 140901662-140906932 Lactuca sativa
Lsat_1_v5_gn_6_86121 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 140901662-140903661 Lactuca sativa
Lsat_1_v5_gn_6_86121 5.0kb upstream 5.0kb upstream 8271   true Lsat_1_v8_lg_6: 140903662-140911932 Lactuca sativa
Lsat_1_v5_gn_6_86121 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 140906933-140911932 Lactuca sativa
Lsat_1_v5_gn_6_86121 5.0kb downstream 5.0kb downstream 8271   true Lsat_1_v8_lg_6: 140898662-140906932 Lactuca sativa
Lsat_1_v5_gn_6_86121 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 140898662-140903661 Lactuca sativa
Lsat_1_v5_gn_6_86121 10.0kb upstream 10.0kb upstream 13271   true Lsat_1_v8_lg_6: 140903662-140916932 Lactuca sativa
Lsat_1_v5_gn_6_86121 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 140906933-140916932 Lactuca sativa
Lsat_1_v5_gn_6_86121 10.0kb downstream 10.0kb downstream 13271   true Lsat_1_v8_lg_6: 140893662-140906932 Lactuca sativa
Lsat_1_v5_gn_6_86121 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 140893662-140903661 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026275 5273 Angiosperm View MSA
121469453 5263 Asterids View MSA
123742624 5271 Pentapetalae View MSA
122793300 5272 Eudicot View MSA
121296256 5274 Embryophyte View MSA
123334452 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain