Gene : Lsat_1_v5_gn_6_87401 L. sativa V8
Defline:  (1 of 2) PF04032 - RNAse P Rpr2/Rpp21/SNM1 subunit domain (Rpr2) Genomic Order:  2509
Name:  ? Lsat_1_v5_gn_6_87401 Secondary Identifier:  ? PAC:38940966
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_87401 0.5kb upstream 0.5kb upstream 2005   true Lsat_1_v8_lg_6: 143936709-143938713 Lactuca sativa
Lsat_1_v5_gn_6_87401 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 143936709-143937208 Lactuca sativa
Lsat_1_v5_gn_6_87401 0.5kb downstream 0.5kb downstream 2005   true Lsat_1_v8_lg_6: 143937209-143939213 Lactuca sativa
Lsat_1_v5_gn_6_87401 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 143938714-143939213 Lactuca sativa
Lsat_1_v5_gn_6_87401 1.0kb upstream 1.0kb upstream 2505   true Lsat_1_v8_lg_6: 143936209-143938713 Lactuca sativa
Lsat_1_v5_gn_6_87401 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 143936209-143937208 Lactuca sativa
Lsat_1_v5_gn_6_87401 1.0kb downstream 1.0kb downstream 2505   true Lsat_1_v8_lg_6: 143937209-143939713 Lactuca sativa
Lsat_1_v5_gn_6_87401 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 143938714-143939713 Lactuca sativa
Lsat_1_v5_gn_6_87401 2.0kb upstream 2.0kb upstream 3505   true Lsat_1_v8_lg_6: 143935209-143938713 Lactuca sativa
Lsat_1_v5_gn_6_87401 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 143935209-143937208 Lactuca sativa
Lsat_1_v5_gn_6_87401 2.0kb downstream 2.0kb downstream 3505   true Lsat_1_v8_lg_6: 143937209-143940713 Lactuca sativa
Lsat_1_v5_gn_6_87401 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 143938714-143940713 Lactuca sativa
Lsat_1_v5_gn_6_87401 5.0kb upstream 5.0kb upstream 6505   true Lsat_1_v8_lg_6: 143932209-143938713 Lactuca sativa
Lsat_1_v5_gn_6_87401 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 143932209-143937208 Lactuca sativa
Lsat_1_v5_gn_6_87401 5.0kb downstream 5.0kb downstream 6505   true Lsat_1_v8_lg_6: 143937209-143943713 Lactuca sativa
Lsat_1_v5_gn_6_87401 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 143938714-143943713 Lactuca sativa
Lsat_1_v5_gn_6_87401 10.0kb upstream 10.0kb upstream 11505   true Lsat_1_v8_lg_6: 143927209-143938713 Lactuca sativa
Lsat_1_v5_gn_6_87401 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 143927209-143937208 Lactuca sativa
Lsat_1_v5_gn_6_87401 10.0kb downstream 10.0kb downstream 11505   true Lsat_1_v8_lg_6: 143937209-143948713 Lactuca sativa
Lsat_1_v5_gn_6_87401 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 143938714-143948713 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474353 5263 Asterids View MSA
123752807 5271 Pentapetalae View MSA
122789291 5272 Eudicot View MSA
122046039 5273 Angiosperm View MSA
121350637 5274 Embryophyte View MSA
123381830 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain