Gene : Lsat_1_v5_gn_6_96540 L. sativa V8
Defline:  (1 of 52) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) Genomic Order:  2833
Name:  ? Lsat_1_v5_gn_6_96540 Secondary Identifier:  ? PAC:38936645
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_96540 0.5kb upstream 0.5kb upstream 6540   true Lsat_1_v8_lg_6: 158723997-158730536 Lactuca sativa
Lsat_1_v5_gn_6_96540 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 158730037-158730536 Lactuca sativa
Lsat_1_v5_gn_6_96540 0.5kb downstream 0.5kb downstream 6540   true Lsat_1_v8_lg_6: 158723497-158730036 Lactuca sativa
Lsat_1_v5_gn_6_96540 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 158723497-158723996 Lactuca sativa
Lsat_1_v5_gn_6_96540 1.0kb upstream 1.0kb upstream 7040   true Lsat_1_v8_lg_6: 158723997-158731036 Lactuca sativa
Lsat_1_v5_gn_6_96540 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 158730037-158731036 Lactuca sativa
Lsat_1_v5_gn_6_96540 1.0kb downstream 1.0kb downstream 7040   true Lsat_1_v8_lg_6: 158722997-158730036 Lactuca sativa
Lsat_1_v5_gn_6_96540 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 158722997-158723996 Lactuca sativa
Lsat_1_v5_gn_6_96540 2.0kb upstream 2.0kb upstream 8040   true Lsat_1_v8_lg_6: 158723997-158732036 Lactuca sativa
Lsat_1_v5_gn_6_96540 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 158730037-158732036 Lactuca sativa
Lsat_1_v5_gn_6_96540 2.0kb downstream 2.0kb downstream 8040   true Lsat_1_v8_lg_6: 158721997-158730036 Lactuca sativa
Lsat_1_v5_gn_6_96540 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 158721997-158723996 Lactuca sativa
Lsat_1_v5_gn_6_96540 5.0kb upstream 5.0kb upstream 11040   true Lsat_1_v8_lg_6: 158723997-158735036 Lactuca sativa
Lsat_1_v5_gn_6_96540 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 158730037-158735036 Lactuca sativa
Lsat_1_v5_gn_6_96540 5.0kb downstream 5.0kb downstream 11040   true Lsat_1_v8_lg_6: 158718997-158730036 Lactuca sativa
Lsat_1_v5_gn_6_96540 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 158718997-158723996 Lactuca sativa
Lsat_1_v5_gn_6_96540 10.0kb upstream 10.0kb upstream 16040   true Lsat_1_v8_lg_6: 158723997-158740036 Lactuca sativa
Lsat_1_v5_gn_6_96540 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 158730037-158740036 Lactuca sativa
Lsat_1_v5_gn_6_96540 10.0kb downstream 10.0kb downstream 16040   true Lsat_1_v8_lg_6: 158713997-158730036 Lactuca sativa
Lsat_1_v5_gn_6_96540 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 158713997-158723996 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479196 5263 Asterids View MSA
123751818 5271 Pentapetalae View MSA
122794753 5272 Eudicot View MSA
122049503 5273 Angiosperm View MSA
121348511 5274 Embryophyte View MSA
123426548 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain