Gene : Lsat_1_v5_gn_0_4140 L. sativa V8
Defline:  (1 of 9) K13126 - polyadenylate-binding protein (PABPC) Genomic Order:  2575
Name:  ? Lsat_1_v5_gn_0_4140 Secondary Identifier:  ? PAC:38912055
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_0_4140 0.5kb upstream 0.5kb upstream 3812   true Lsat_1_v8_lg_7: 145673066-145676877 Lactuca sativa
Lsat_1_v5_gn_0_4140 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 145673066-145673565 Lactuca sativa
Lsat_1_v5_gn_0_4140 0.5kb downstream 0.5kb downstream 3812   true Lsat_1_v8_lg_7: 145673566-145677377 Lactuca sativa
Lsat_1_v5_gn_0_4140 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 145676878-145677377 Lactuca sativa
Lsat_1_v5_gn_0_4140 1.0kb upstream 1.0kb upstream 4312   true Lsat_1_v8_lg_7: 145672566-145676877 Lactuca sativa
Lsat_1_v5_gn_0_4140 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 145672566-145673565 Lactuca sativa
Lsat_1_v5_gn_0_4140 1.0kb downstream 1.0kb downstream 4312   true Lsat_1_v8_lg_7: 145673566-145677877 Lactuca sativa
Lsat_1_v5_gn_0_4140 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 145676878-145677877 Lactuca sativa
Lsat_1_v5_gn_0_4140 2.0kb upstream 2.0kb upstream 5312   true Lsat_1_v8_lg_7: 145671566-145676877 Lactuca sativa
Lsat_1_v5_gn_0_4140 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 145671566-145673565 Lactuca sativa
Lsat_1_v5_gn_0_4140 2.0kb downstream 2.0kb downstream 5312   true Lsat_1_v8_lg_7: 145673566-145678877 Lactuca sativa
Lsat_1_v5_gn_0_4140 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 145676878-145678877 Lactuca sativa
Lsat_1_v5_gn_0_4140 5.0kb upstream 5.0kb upstream 8312   true Lsat_1_v8_lg_7: 145668566-145676877 Lactuca sativa
Lsat_1_v5_gn_0_4140 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 145668566-145673565 Lactuca sativa
Lsat_1_v5_gn_0_4140 5.0kb downstream 5.0kb downstream 8312   true Lsat_1_v8_lg_7: 145673566-145681877 Lactuca sativa
Lsat_1_v5_gn_0_4140 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 145676878-145681877 Lactuca sativa
Lsat_1_v5_gn_0_4140 10.0kb upstream 10.0kb upstream 13312   true Lsat_1_v8_lg_7: 145663566-145676877 Lactuca sativa
Lsat_1_v5_gn_0_4140 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 145663566-145673565 Lactuca sativa
Lsat_1_v5_gn_0_4140 10.0kb downstream 10.0kb downstream 13312   true Lsat_1_v8_lg_7: 145673566-145686877 Lactuca sativa
Lsat_1_v5_gn_0_4140 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 145676878-145686877 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477990 5263 Asterids View MSA
123741893 5271 Pentapetalae View MSA
122797353 5272 Eudicot View MSA
122046831 5273 Angiosperm View MSA
121349622 5274 Embryophyte View MSA
123428043 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain