Gene : Lsat_1_v5_gn_6_70541 L. sativa V8
Defline:  (1 of 1) K10589 - ubiquitin-protein ligase E3 C (UBE3C) Genomic Order:  2037
Name:  ? Lsat_1_v5_gn_6_70541 Secondary Identifier:  ? PAC:38937831
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-7511 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_70541 0.5kb upstream 0.5kb upstream 7995   true Lsat_1_v8_lg_6: 112125585-112133579 Lactuca sativa
Lsat_1_v5_gn_6_70541 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 112125585-112126084 Lactuca sativa
Lsat_1_v5_gn_6_70541 0.5kb downstream 0.5kb downstream 7995   true Lsat_1_v8_lg_6: 112126085-112134079 Lactuca sativa
Lsat_1_v5_gn_6_70541 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 112133580-112134079 Lactuca sativa
Lsat_1_v5_gn_6_70541 1.0kb upstream 1.0kb upstream 8495   true Lsat_1_v8_lg_6: 112125085-112133579 Lactuca sativa
Lsat_1_v5_gn_6_70541 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 112125085-112126084 Lactuca sativa
Lsat_1_v5_gn_6_70541 1.0kb downstream 1.0kb downstream 8495   true Lsat_1_v8_lg_6: 112126085-112134579 Lactuca sativa
Lsat_1_v5_gn_6_70541 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 112133580-112134579 Lactuca sativa
Lsat_1_v5_gn_6_70541 2.0kb upstream 2.0kb upstream 9495   true Lsat_1_v8_lg_6: 112124085-112133579 Lactuca sativa
Lsat_1_v5_gn_6_70541 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 112124085-112126084 Lactuca sativa
Lsat_1_v5_gn_6_70541 2.0kb downstream 2.0kb downstream 9495   true Lsat_1_v8_lg_6: 112126085-112135579 Lactuca sativa
Lsat_1_v5_gn_6_70541 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 112133580-112135579 Lactuca sativa
Lsat_1_v5_gn_6_70541 5.0kb upstream 5.0kb upstream 12495   true Lsat_1_v8_lg_6: 112121085-112133579 Lactuca sativa
Lsat_1_v5_gn_6_70541 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 112121085-112126084 Lactuca sativa
Lsat_1_v5_gn_6_70541 5.0kb downstream 5.0kb downstream 12495   true Lsat_1_v8_lg_6: 112126085-112138579 Lactuca sativa
Lsat_1_v5_gn_6_70541 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 112133580-112138579 Lactuca sativa
Lsat_1_v5_gn_6_70541 10.0kb upstream 10.0kb upstream 17495   true Lsat_1_v8_lg_6: 112116085-112133579 Lactuca sativa
Lsat_1_v5_gn_6_70541 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 112116085-112126084 Lactuca sativa
Lsat_1_v5_gn_6_70541 10.0kb downstream 10.0kb downstream 17495   true Lsat_1_v8_lg_6: 112126085-112143579 Lactuca sativa
Lsat_1_v5_gn_6_70541 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 112133580-112143579 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474036 5263 Asterids View MSA
123740343 5271 Pentapetalae View MSA
122788318 5272 Eudicot View MSA
122046917 5273 Angiosperm View MSA
123429069 5275 Viridiplantae View MSA
121344767 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain