Gene : Lsat_1_v5_gn_6_78780 L. sativa V8
Defline:  (1 of 7) 3.2.1.37//3.2.1.55 - Xylan 1,4-beta-xylosidase / Xylobiase // Non-reducing end alpha-L-arabinofuranosidase / Arabinosidase Genomic Order:  2267
Name:  ? Lsat_1_v5_gn_6_78780 Secondary Identifier:  ? PAC:38940836
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_78780 0.5kb upstream 0.5kb upstream 4181   true Lsat_1_v8_lg_6: 129543892-129548072 Lactuca sativa
Lsat_1_v5_gn_6_78780 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 129543892-129544391 Lactuca sativa
Lsat_1_v5_gn_6_78780 0.5kb downstream 0.5kb downstream 4181   true Lsat_1_v8_lg_6: 129544392-129548572 Lactuca sativa
Lsat_1_v5_gn_6_78780 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 129548073-129548572 Lactuca sativa
Lsat_1_v5_gn_6_78780 1.0kb upstream 1.0kb upstream 4681   true Lsat_1_v8_lg_6: 129543392-129548072 Lactuca sativa
Lsat_1_v5_gn_6_78780 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 129543392-129544391 Lactuca sativa
Lsat_1_v5_gn_6_78780 1.0kb downstream 1.0kb downstream 4681   true Lsat_1_v8_lg_6: 129544392-129549072 Lactuca sativa
Lsat_1_v5_gn_6_78780 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 129548073-129549072 Lactuca sativa
Lsat_1_v5_gn_6_78780 2.0kb upstream 2.0kb upstream 5681   true Lsat_1_v8_lg_6: 129542392-129548072 Lactuca sativa
Lsat_1_v5_gn_6_78780 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 129542392-129544391 Lactuca sativa
Lsat_1_v5_gn_6_78780 2.0kb downstream 2.0kb downstream 5681   true Lsat_1_v8_lg_6: 129544392-129550072 Lactuca sativa
Lsat_1_v5_gn_6_78780 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 129548073-129550072 Lactuca sativa
Lsat_1_v5_gn_6_78780 5.0kb upstream 5.0kb upstream 8681   true Lsat_1_v8_lg_6: 129539392-129548072 Lactuca sativa
Lsat_1_v5_gn_6_78780 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 129539392-129544391 Lactuca sativa
Lsat_1_v5_gn_6_78780 5.0kb downstream 5.0kb downstream 8681   true Lsat_1_v8_lg_6: 129544392-129553072 Lactuca sativa
Lsat_1_v5_gn_6_78780 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 129548073-129553072 Lactuca sativa
Lsat_1_v5_gn_6_78780 10.0kb upstream 10.0kb upstream 13681   true Lsat_1_v8_lg_6: 129534392-129548072 Lactuca sativa
Lsat_1_v5_gn_6_78780 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 129534392-129544391 Lactuca sativa
Lsat_1_v5_gn_6_78780 10.0kb downstream 10.0kb downstream 13681   true Lsat_1_v8_lg_6: 129544392-129558072 Lactuca sativa
Lsat_1_v5_gn_6_78780 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 129548073-129558072 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121453523 5263 Asterids View MSA
123741609 5271 Pentapetalae View MSA
122789440 5272 Eudicot View MSA
122043210 5273 Angiosperm View MSA
121349595 5274 Embryophyte View MSA
123381370 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain