Gene : Lsat_1_v5_gn_6_80720 L. sativa V8
Defline:  (1 of 2) K14297 - nuclear pore complex protein Nup98-Nup96 (NUP98, ADAR2, NUP116) Genomic Order:  2352
Name:  ? Lsat_1_v5_gn_6_80720 Secondary Identifier:  ? PAC:38941660
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_80720 0.5kb upstream 0.5kb upstream 6302   true Lsat_1_v8_lg_6: 133654269-133660570 Lactuca sativa
Lsat_1_v5_gn_6_80720 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 133654269-133654768 Lactuca sativa
Lsat_1_v5_gn_6_80720 0.5kb downstream 0.5kb downstream 6302   true Lsat_1_v8_lg_6: 133654769-133661070 Lactuca sativa
Lsat_1_v5_gn_6_80720 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 133660571-133661070 Lactuca sativa
Lsat_1_v5_gn_6_80720 1.0kb upstream 1.0kb upstream 6802   true Lsat_1_v8_lg_6: 133653769-133660570 Lactuca sativa
Lsat_1_v5_gn_6_80720 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 133653769-133654768 Lactuca sativa
Lsat_1_v5_gn_6_80720 1.0kb downstream 1.0kb downstream 6802   true Lsat_1_v8_lg_6: 133654769-133661570 Lactuca sativa
Lsat_1_v5_gn_6_80720 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 133660571-133661570 Lactuca sativa
Lsat_1_v5_gn_6_80720 2.0kb upstream 2.0kb upstream 7802   true Lsat_1_v8_lg_6: 133652769-133660570 Lactuca sativa
Lsat_1_v5_gn_6_80720 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 133652769-133654768 Lactuca sativa
Lsat_1_v5_gn_6_80720 2.0kb downstream 2.0kb downstream 7802   true Lsat_1_v8_lg_6: 133654769-133662570 Lactuca sativa
Lsat_1_v5_gn_6_80720 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 133660571-133662570 Lactuca sativa
Lsat_1_v5_gn_6_80720 5.0kb upstream 5.0kb upstream 10802   true Lsat_1_v8_lg_6: 133649769-133660570 Lactuca sativa
Lsat_1_v5_gn_6_80720 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 133649769-133654768 Lactuca sativa
Lsat_1_v5_gn_6_80720 5.0kb downstream 5.0kb downstream 10802   true Lsat_1_v8_lg_6: 133654769-133665570 Lactuca sativa
Lsat_1_v5_gn_6_80720 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 133660571-133665570 Lactuca sativa
Lsat_1_v5_gn_6_80720 10.0kb upstream 10.0kb upstream 15802   true Lsat_1_v8_lg_6: 133644769-133660570 Lactuca sativa
Lsat_1_v5_gn_6_80720 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 133644769-133654768 Lactuca sativa
Lsat_1_v5_gn_6_80720 10.0kb downstream 10.0kb downstream 15802   true Lsat_1_v8_lg_6: 133654769-133670570 Lactuca sativa
Lsat_1_v5_gn_6_80720 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 133660571-133670570 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472918 5263 Asterids View MSA
123748776 5271 Pentapetalae View MSA
122797875 5272 Eudicot View MSA
122041710 5273 Angiosperm View MSA
121349617 5274 Embryophyte View MSA
123427472 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain