Gene : Lsat_1_v5_gn_6_84020 L. sativa V8
Defline:  (1 of 2) 2.1.1.183 - 18S rRNA (adenine(1779)-N(6)/adenine(1780)-N(6))-dimethyltransferase Genomic Order:  2440
Name:  ? Lsat_1_v5_gn_6_84020 Secondary Identifier:  ? PAC:38937747
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_84020 0.5kb upstream 0.5kb upstream 2257   true Lsat_1_v8_lg_6: 138981409-138983665 Lactuca sativa
Lsat_1_v5_gn_6_84020 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_6: 138981409-138981908 Lactuca sativa
Lsat_1_v5_gn_6_84020 0.5kb downstream 0.5kb downstream 2257   true Lsat_1_v8_lg_6: 138981909-138984165 Lactuca sativa
Lsat_1_v5_gn_6_84020 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_6: 138983666-138984165 Lactuca sativa
Lsat_1_v5_gn_6_84020 1.0kb upstream 1.0kb upstream 2757   true Lsat_1_v8_lg_6: 138980909-138983665 Lactuca sativa
Lsat_1_v5_gn_6_84020 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_6: 138980909-138981908 Lactuca sativa
Lsat_1_v5_gn_6_84020 1.0kb downstream 1.0kb downstream 2757   true Lsat_1_v8_lg_6: 138981909-138984665 Lactuca sativa
Lsat_1_v5_gn_6_84020 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_6: 138983666-138984665 Lactuca sativa
Lsat_1_v5_gn_6_84020 2.0kb upstream 2.0kb upstream 3757   true Lsat_1_v8_lg_6: 138979909-138983665 Lactuca sativa
Lsat_1_v5_gn_6_84020 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_6: 138979909-138981908 Lactuca sativa
Lsat_1_v5_gn_6_84020 2.0kb downstream 2.0kb downstream 3757   true Lsat_1_v8_lg_6: 138981909-138985665 Lactuca sativa
Lsat_1_v5_gn_6_84020 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_6: 138983666-138985665 Lactuca sativa
Lsat_1_v5_gn_6_84020 5.0kb upstream 5.0kb upstream 6757   true Lsat_1_v8_lg_6: 138976909-138983665 Lactuca sativa
Lsat_1_v5_gn_6_84020 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_6: 138976909-138981908 Lactuca sativa
Lsat_1_v5_gn_6_84020 5.0kb downstream 5.0kb downstream 6757   true Lsat_1_v8_lg_6: 138981909-138988665 Lactuca sativa
Lsat_1_v5_gn_6_84020 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_6: 138983666-138988665 Lactuca sativa
Lsat_1_v5_gn_6_84020 10.0kb upstream 10.0kb upstream 11757   true Lsat_1_v8_lg_6: 138971909-138983665 Lactuca sativa
Lsat_1_v5_gn_6_84020 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_6: 138971909-138981908 Lactuca sativa
Lsat_1_v5_gn_6_84020 10.0kb downstream 10.0kb downstream 11757   true Lsat_1_v8_lg_6: 138981909-138993665 Lactuca sativa
Lsat_1_v5_gn_6_84020 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_6: 138983666-138993665 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475362 5263 Asterids View MSA
123741013 5271 Pentapetalae View MSA
122790361 5272 Eudicot View MSA
122042142 5273 Angiosperm View MSA
121344705 5274 Embryophyte View MSA
123426456 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain