Gene : Lsat_1_v5_gn_7_22741 L. sativa V8
Defline:  (1 of 1) PTHR11468//PTHR11468:SF3 - GLYCOGEN PHOSPHORYLASE // GLYCOGEN PHOSPHORYLASE Genomic Order:  739
Name:  ? Lsat_1_v5_gn_7_22741 Secondary Identifier:  ? PAC:38914315
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-5941 Lactuca sativa pathologic  
Lsativa PWY-7238 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_22741 0.5kb upstream 0.5kb upstream 7110   true Lsat_1_v8_lg_7: 29057630-29064739 Lactuca sativa
Lsat_1_v5_gn_7_22741 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 29064240-29064739 Lactuca sativa
Lsat_1_v5_gn_7_22741 0.5kb downstream 0.5kb downstream 7110   true Lsat_1_v8_lg_7: 29057130-29064239 Lactuca sativa
Lsat_1_v5_gn_7_22741 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 29057130-29057629 Lactuca sativa
Lsat_1_v5_gn_7_22741 1.0kb upstream 1.0kb upstream 7610   true Lsat_1_v8_lg_7: 29057630-29065239 Lactuca sativa
Lsat_1_v5_gn_7_22741 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 29064240-29065239 Lactuca sativa
Lsat_1_v5_gn_7_22741 1.0kb downstream 1.0kb downstream 7610   true Lsat_1_v8_lg_7: 29056630-29064239 Lactuca sativa
Lsat_1_v5_gn_7_22741 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 29056630-29057629 Lactuca sativa
Lsat_1_v5_gn_7_22741 2.0kb upstream 2.0kb upstream 8610   true Lsat_1_v8_lg_7: 29057630-29066239 Lactuca sativa
Lsat_1_v5_gn_7_22741 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 29064240-29066239 Lactuca sativa
Lsat_1_v5_gn_7_22741 2.0kb downstream 2.0kb downstream 8610   true Lsat_1_v8_lg_7: 29055630-29064239 Lactuca sativa
Lsat_1_v5_gn_7_22741 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 29055630-29057629 Lactuca sativa
Lsat_1_v5_gn_7_22741 5.0kb upstream 5.0kb upstream 11610   true Lsat_1_v8_lg_7: 29057630-29069239 Lactuca sativa
Lsat_1_v5_gn_7_22741 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 29064240-29069239 Lactuca sativa
Lsat_1_v5_gn_7_22741 5.0kb downstream 5.0kb downstream 11610   true Lsat_1_v8_lg_7: 29052630-29064239 Lactuca sativa
Lsat_1_v5_gn_7_22741 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 29052630-29057629 Lactuca sativa
Lsat_1_v5_gn_7_22741 10.0kb upstream 10.0kb upstream 16610   true Lsat_1_v8_lg_7: 29057630-29074239 Lactuca sativa
Lsat_1_v5_gn_7_22741 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 29064240-29074239 Lactuca sativa
Lsat_1_v5_gn_7_22741 10.0kb downstream 10.0kb downstream 16610   true Lsat_1_v8_lg_7: 29047630-29064239 Lactuca sativa
Lsat_1_v5_gn_7_22741 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 29047630-29057629 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469232 5263 Asterids View MSA
123742386 5271 Pentapetalae View MSA
122770279 5272 Eudicot View MSA
122048524 5273 Angiosperm View MSA
121348195 5274 Embryophyte View MSA
123425744 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain