Gene : Lsat_1_v5_gn_7_22781 L. sativa V8
Defline:  (1 of 1) PF00046//PF02791//PF05066//PF15613//PF15614 - Homeobox domain (Homeobox) // DDT domain (DDT) // HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) // WSTF, HB1, Itc1p, MBD9 motif 2 (WHIM2) // WSTF, HB1, Itc1p, MBD9 motif 3 (WHIM3) Genomic Order:  741
Name:  ? Lsat_1_v5_gn_7_22781 Secondary Identifier:  ? PAC:38913140
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_22781 0.5kb upstream 0.5kb upstream 10048   true Lsat_1_v8_lg_7: 29095435-29105482 Lactuca sativa
Lsat_1_v5_gn_7_22781 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 29104983-29105482 Lactuca sativa
Lsat_1_v5_gn_7_22781 0.5kb downstream 0.5kb downstream 10048   true Lsat_1_v8_lg_7: 29094935-29104982 Lactuca sativa
Lsat_1_v5_gn_7_22781 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 29094935-29095434 Lactuca sativa
Lsat_1_v5_gn_7_22781 1.0kb upstream 1.0kb upstream 10548   true Lsat_1_v8_lg_7: 29095435-29105982 Lactuca sativa
Lsat_1_v5_gn_7_22781 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 29104983-29105982 Lactuca sativa
Lsat_1_v5_gn_7_22781 1.0kb downstream 1.0kb downstream 10548   true Lsat_1_v8_lg_7: 29094435-29104982 Lactuca sativa
Lsat_1_v5_gn_7_22781 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 29094435-29095434 Lactuca sativa
Lsat_1_v5_gn_7_22781 2.0kb upstream 2.0kb upstream 11548   true Lsat_1_v8_lg_7: 29095435-29106982 Lactuca sativa
Lsat_1_v5_gn_7_22781 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 29104983-29106982 Lactuca sativa
Lsat_1_v5_gn_7_22781 2.0kb downstream 2.0kb downstream 11548   true Lsat_1_v8_lg_7: 29093435-29104982 Lactuca sativa
Lsat_1_v5_gn_7_22781 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 29093435-29095434 Lactuca sativa
Lsat_1_v5_gn_7_22781 5.0kb upstream 5.0kb upstream 14548   true Lsat_1_v8_lg_7: 29095435-29109982 Lactuca sativa
Lsat_1_v5_gn_7_22781 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 29104983-29109982 Lactuca sativa
Lsat_1_v5_gn_7_22781 5.0kb downstream 5.0kb downstream 14548   true Lsat_1_v8_lg_7: 29090435-29104982 Lactuca sativa
Lsat_1_v5_gn_7_22781 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 29090435-29095434 Lactuca sativa
Lsat_1_v5_gn_7_22781 10.0kb upstream 10.0kb upstream 19548   true Lsat_1_v8_lg_7: 29095435-29114982 Lactuca sativa
Lsat_1_v5_gn_7_22781 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 29104983-29114982 Lactuca sativa
Lsat_1_v5_gn_7_22781 10.0kb downstream 10.0kb downstream 19548   true Lsat_1_v8_lg_7: 29085435-29104982 Lactuca sativa
Lsat_1_v5_gn_7_22781 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 29085435-29095434 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474338 5263 Asterids View MSA
123743717 5271 Pentapetalae View MSA
122786620 5272 Eudicot View MSA
122044576 5273 Angiosperm View MSA
121345296 5274 Embryophyte View MSA
123427491 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain