Gene : Lsat_1_v5_gn_7_27401 L. sativa V8
Defline:  (1 of 1) KOG1246 - DNA-binding protein jumonji/RBP2/SMCY, contains JmjC domain Genomic Order:  910
Name:  ? Lsat_1_v5_gn_7_27401 Secondary Identifier:  ? PAC:38910332
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_27401 0.5kb upstream 0.5kb upstream 5779   true Lsat_1_v8_lg_7: 36949878-36955656 Lactuca sativa
Lsat_1_v5_gn_7_27401 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 36955157-36955656 Lactuca sativa
Lsat_1_v5_gn_7_27401 0.5kb downstream 0.5kb downstream 5779   true Lsat_1_v8_lg_7: 36949378-36955156 Lactuca sativa
Lsat_1_v5_gn_7_27401 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 36949378-36949877 Lactuca sativa
Lsat_1_v5_gn_7_27401 1.0kb upstream 1.0kb upstream 6279   true Lsat_1_v8_lg_7: 36949878-36956156 Lactuca sativa
Lsat_1_v5_gn_7_27401 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 36955157-36956156 Lactuca sativa
Lsat_1_v5_gn_7_27401 1.0kb downstream 1.0kb downstream 6279   true Lsat_1_v8_lg_7: 36948878-36955156 Lactuca sativa
Lsat_1_v5_gn_7_27401 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 36948878-36949877 Lactuca sativa
Lsat_1_v5_gn_7_27401 2.0kb upstream 2.0kb upstream 7279   true Lsat_1_v8_lg_7: 36949878-36957156 Lactuca sativa
Lsat_1_v5_gn_7_27401 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 36955157-36957156 Lactuca sativa
Lsat_1_v5_gn_7_27401 2.0kb downstream 2.0kb downstream 7279   true Lsat_1_v8_lg_7: 36947878-36955156 Lactuca sativa
Lsat_1_v5_gn_7_27401 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 36947878-36949877 Lactuca sativa
Lsat_1_v5_gn_7_27401 5.0kb upstream 5.0kb upstream 10279   true Lsat_1_v8_lg_7: 36949878-36960156 Lactuca sativa
Lsat_1_v5_gn_7_27401 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 36955157-36960156 Lactuca sativa
Lsat_1_v5_gn_7_27401 5.0kb downstream 5.0kb downstream 10279   true Lsat_1_v8_lg_7: 36944878-36955156 Lactuca sativa
Lsat_1_v5_gn_7_27401 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 36944878-36949877 Lactuca sativa
Lsat_1_v5_gn_7_27401 10.0kb upstream 10.0kb upstream 15279   true Lsat_1_v8_lg_7: 36949878-36965156 Lactuca sativa
Lsat_1_v5_gn_7_27401 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 36955157-36965156 Lactuca sativa
Lsat_1_v5_gn_7_27401 10.0kb downstream 10.0kb downstream 15279   true Lsat_1_v8_lg_7: 36939878-36955156 Lactuca sativa
Lsat_1_v5_gn_7_27401 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 36939878-36949877 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121447145 5263 Asterids Singleton cluster - no MSA
123746052 5271 Pentapetalae View MSA
122771756 5272 Eudicot View MSA
122050637 5273 Angiosperm View MSA
123428928 5275 Viridiplantae View MSA
121350129 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain