Gene : Lsat_1_v5_gn_7_29060 L. sativa V8
Defline:  (1 of 1) PTHR11214//PTHR11214:SF92 - BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE // BETA-1,3-GALACTOSYLTRANSFERASE 20-RELATED Genomic Order:  955
Name:  ? Lsat_1_v5_gn_7_29060 Secondary Identifier:  ? PAC:38909627
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_29060 0.5kb upstream 0.5kb upstream 5144   true Lsat_1_v8_lg_7: 40148713-40153856 Lactuca sativa
Lsat_1_v5_gn_7_29060 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 40148713-40149212 Lactuca sativa
Lsat_1_v5_gn_7_29060 0.5kb downstream 0.5kb downstream 5144   true Lsat_1_v8_lg_7: 40149213-40154356 Lactuca sativa
Lsat_1_v5_gn_7_29060 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 40153857-40154356 Lactuca sativa
Lsat_1_v5_gn_7_29060 1.0kb upstream 1.0kb upstream 5644   true Lsat_1_v8_lg_7: 40148213-40153856 Lactuca sativa
Lsat_1_v5_gn_7_29060 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 40148213-40149212 Lactuca sativa
Lsat_1_v5_gn_7_29060 1.0kb downstream 1.0kb downstream 5644   true Lsat_1_v8_lg_7: 40149213-40154856 Lactuca sativa
Lsat_1_v5_gn_7_29060 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 40153857-40154856 Lactuca sativa
Lsat_1_v5_gn_7_29060 2.0kb upstream 2.0kb upstream 6644   true Lsat_1_v8_lg_7: 40147213-40153856 Lactuca sativa
Lsat_1_v5_gn_7_29060 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 40147213-40149212 Lactuca sativa
Lsat_1_v5_gn_7_29060 2.0kb downstream 2.0kb downstream 6644   true Lsat_1_v8_lg_7: 40149213-40155856 Lactuca sativa
Lsat_1_v5_gn_7_29060 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 40153857-40155856 Lactuca sativa
Lsat_1_v5_gn_7_29060 5.0kb upstream 5.0kb upstream 9644   true Lsat_1_v8_lg_7: 40144213-40153856 Lactuca sativa
Lsat_1_v5_gn_7_29060 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 40144213-40149212 Lactuca sativa
Lsat_1_v5_gn_7_29060 5.0kb downstream 5.0kb downstream 9644   true Lsat_1_v8_lg_7: 40149213-40158856 Lactuca sativa
Lsat_1_v5_gn_7_29060 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 40153857-40158856 Lactuca sativa
Lsat_1_v5_gn_7_29060 10.0kb upstream 10.0kb upstream 14644   true Lsat_1_v8_lg_7: 40139213-40153856 Lactuca sativa
Lsat_1_v5_gn_7_29060 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 40139213-40149212 Lactuca sativa
Lsat_1_v5_gn_7_29060 10.0kb downstream 10.0kb downstream 14644   true Lsat_1_v8_lg_7: 40149213-40163856 Lactuca sativa
Lsat_1_v5_gn_7_29060 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 40153857-40163856 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470600 5263 Asterids View MSA
123750268 5271 Pentapetalae View MSA
122792852 5272 Eudicot View MSA
122049644 5273 Angiosperm View MSA
121350326 5274 Embryophyte View MSA
123381679 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain