Gene : Lsat_1_v5_gn_7_108481 L. sativa V8
Defline:  (1 of 2) PTHR13048 - TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 3 Genomic Order:  3221
Name:  ? Lsat_1_v5_gn_7_108481 Secondary Identifier:  ? PAC:38914432
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_108481 0.5kb upstream 0.5kb upstream 1984   true Lsat_1_v8_lg_7: 182521238-182523221 Lactuca sativa
Lsat_1_v5_gn_7_108481 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 182521238-182521737 Lactuca sativa
Lsat_1_v5_gn_7_108481 0.5kb downstream 0.5kb downstream 1984   true Lsat_1_v8_lg_7: 182521738-182523721 Lactuca sativa
Lsat_1_v5_gn_7_108481 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 182523222-182523721 Lactuca sativa
Lsat_1_v5_gn_7_108481 1.0kb upstream 1.0kb upstream 2484   true Lsat_1_v8_lg_7: 182520738-182523221 Lactuca sativa
Lsat_1_v5_gn_7_108481 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 182520738-182521737 Lactuca sativa
Lsat_1_v5_gn_7_108481 1.0kb downstream 1.0kb downstream 2484   true Lsat_1_v8_lg_7: 182521738-182524221 Lactuca sativa
Lsat_1_v5_gn_7_108481 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 182523222-182524221 Lactuca sativa
Lsat_1_v5_gn_7_108481 2.0kb upstream 2.0kb upstream 3484   true Lsat_1_v8_lg_7: 182519738-182523221 Lactuca sativa
Lsat_1_v5_gn_7_108481 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 182519738-182521737 Lactuca sativa
Lsat_1_v5_gn_7_108481 2.0kb downstream 2.0kb downstream 3484   true Lsat_1_v8_lg_7: 182521738-182525221 Lactuca sativa
Lsat_1_v5_gn_7_108481 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 182523222-182525221 Lactuca sativa
Lsat_1_v5_gn_7_108481 5.0kb upstream 5.0kb upstream 6484   true Lsat_1_v8_lg_7: 182516738-182523221 Lactuca sativa
Lsat_1_v5_gn_7_108481 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 182516738-182521737 Lactuca sativa
Lsat_1_v5_gn_7_108481 5.0kb downstream 5.0kb downstream 6484   true Lsat_1_v8_lg_7: 182521738-182528221 Lactuca sativa
Lsat_1_v5_gn_7_108481 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 182523222-182528221 Lactuca sativa
Lsat_1_v5_gn_7_108481 10.0kb upstream 10.0kb upstream 11484   true Lsat_1_v8_lg_7: 182511738-182523221 Lactuca sativa
Lsat_1_v5_gn_7_108481 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 182511738-182521737 Lactuca sativa
Lsat_1_v5_gn_7_108481 10.0kb downstream 10.0kb downstream 11484   true Lsat_1_v8_lg_7: 182521738-182533221 Lactuca sativa
Lsat_1_v5_gn_7_108481 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 182523222-182533221 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479698 5263 Asterids View MSA
123738457 5271 Pentapetalae View MSA
122793674 5272 Eudicot View MSA
122046284 5273 Angiosperm View MSA
121345634 5274 Embryophyte View MSA
123425946 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain