Gene : Lsat_1_v5_gn_7_110921 L. sativa V8
Defline:  (1 of 479) PF13041 - PPR repeat family (PPR_2) Genomic Order:  3303
Name:  ? Lsat_1_v5_gn_7_110921 Secondary Identifier:  ? PAC:38909473
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_110921 0.5kb upstream 0.5kb upstream 3302   true Lsat_1_v8_lg_7: 185214355-185217656 Lactuca sativa
Lsat_1_v5_gn_7_110921 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 185214355-185214854 Lactuca sativa
Lsat_1_v5_gn_7_110921 0.5kb downstream 0.5kb downstream 3302   true Lsat_1_v8_lg_7: 185214855-185218156 Lactuca sativa
Lsat_1_v5_gn_7_110921 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 185217657-185218156 Lactuca sativa
Lsat_1_v5_gn_7_110921 1.0kb upstream 1.0kb upstream 3802   true Lsat_1_v8_lg_7: 185213855-185217656 Lactuca sativa
Lsat_1_v5_gn_7_110921 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 185213855-185214854 Lactuca sativa
Lsat_1_v5_gn_7_110921 1.0kb downstream 1.0kb downstream 3802   true Lsat_1_v8_lg_7: 185214855-185218656 Lactuca sativa
Lsat_1_v5_gn_7_110921 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 185217657-185218656 Lactuca sativa
Lsat_1_v5_gn_7_110921 2.0kb upstream 2.0kb upstream 4802   true Lsat_1_v8_lg_7: 185212855-185217656 Lactuca sativa
Lsat_1_v5_gn_7_110921 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 185212855-185214854 Lactuca sativa
Lsat_1_v5_gn_7_110921 2.0kb downstream 2.0kb downstream 4802   true Lsat_1_v8_lg_7: 185214855-185219656 Lactuca sativa
Lsat_1_v5_gn_7_110921 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 185217657-185219656 Lactuca sativa
Lsat_1_v5_gn_7_110921 5.0kb upstream 5.0kb upstream 7802   true Lsat_1_v8_lg_7: 185209855-185217656 Lactuca sativa
Lsat_1_v5_gn_7_110921 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 185209855-185214854 Lactuca sativa
Lsat_1_v5_gn_7_110921 5.0kb downstream 5.0kb downstream 7802   true Lsat_1_v8_lg_7: 185214855-185222656 Lactuca sativa
Lsat_1_v5_gn_7_110921 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 185217657-185222656 Lactuca sativa
Lsat_1_v5_gn_7_110921 10.0kb upstream 10.0kb upstream 12802   true Lsat_1_v8_lg_7: 185204855-185217656 Lactuca sativa
Lsat_1_v5_gn_7_110921 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 185204855-185214854 Lactuca sativa
Lsat_1_v5_gn_7_110921 10.0kb downstream 10.0kb downstream 12802   true Lsat_1_v8_lg_7: 185214855-185227656 Lactuca sativa
Lsat_1_v5_gn_7_110921 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 185217657-185227656 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471774 5263 Asterids View MSA
123739222 5271 Pentapetalae View MSA
122787096 5272 Eudicot View MSA
122044895 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121350963 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain