Gene : Lsat_1_v5_gn_7_114320 L. sativa V8
Defline:  (1 of 1) K03500 - 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] (rsmB, sun) Genomic Order:  3450
Name:  ? Lsat_1_v5_gn_7_114320 Secondary Identifier:  ? PAC:38914984
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_114320 0.5kb upstream 0.5kb upstream 5607   true Lsat_1_v8_lg_7: 193858586-193864192 Lactuca sativa
Lsat_1_v5_gn_7_114320 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 193863693-193864192 Lactuca sativa
Lsat_1_v5_gn_7_114320 0.5kb downstream 0.5kb downstream 5607   true Lsat_1_v8_lg_7: 193858086-193863692 Lactuca sativa
Lsat_1_v5_gn_7_114320 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 193858086-193858585 Lactuca sativa
Lsat_1_v5_gn_7_114320 1.0kb upstream 1.0kb upstream 6107   true Lsat_1_v8_lg_7: 193858586-193864692 Lactuca sativa
Lsat_1_v5_gn_7_114320 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 193863693-193864692 Lactuca sativa
Lsat_1_v5_gn_7_114320 1.0kb downstream 1.0kb downstream 6107   true Lsat_1_v8_lg_7: 193857586-193863692 Lactuca sativa
Lsat_1_v5_gn_7_114320 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 193857586-193858585 Lactuca sativa
Lsat_1_v5_gn_7_114320 2.0kb upstream 2.0kb upstream 7107   true Lsat_1_v8_lg_7: 193858586-193865692 Lactuca sativa
Lsat_1_v5_gn_7_114320 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 193863693-193865692 Lactuca sativa
Lsat_1_v5_gn_7_114320 2.0kb downstream 2.0kb downstream 7107   true Lsat_1_v8_lg_7: 193856586-193863692 Lactuca sativa
Lsat_1_v5_gn_7_114320 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 193856586-193858585 Lactuca sativa
Lsat_1_v5_gn_7_114320 5.0kb upstream 5.0kb upstream 10107   true Lsat_1_v8_lg_7: 193858586-193868692 Lactuca sativa
Lsat_1_v5_gn_7_114320 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 193863693-193868692 Lactuca sativa
Lsat_1_v5_gn_7_114320 5.0kb downstream 5.0kb downstream 10107   true Lsat_1_v8_lg_7: 193853586-193863692 Lactuca sativa
Lsat_1_v5_gn_7_114320 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 193853586-193858585 Lactuca sativa
Lsat_1_v5_gn_7_114320 10.0kb upstream 10.0kb upstream 15107   true Lsat_1_v8_lg_7: 193858586-193873692 Lactuca sativa
Lsat_1_v5_gn_7_114320 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 193863693-193873692 Lactuca sativa
Lsat_1_v5_gn_7_114320 10.0kb downstream 10.0kb downstream 15107   true Lsat_1_v8_lg_7: 193848586-193863692 Lactuca sativa
Lsat_1_v5_gn_7_114320 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 193848586-193858585 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470453 5263 Asterids View MSA
123740047 5271 Pentapetalae View MSA
122787436 5272 Eudicot View MSA
122043907 5273 Angiosperm View MSA
121346553 5274 Embryophyte View MSA
123427921 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain