Gene : Lsat_1_v5_gn_7_116420 L. sativa V8
Defline:  (1 of 2) PTHR24078//PTHR24078:SF190 - DNAJ HOMOLOG SUBFAMILY C MEMBER // SUBFAMILY NOT NAMED Genomic Order:  3405
Name:  ? Lsat_1_v5_gn_7_116420 Secondary Identifier:  ? PAC:38909925
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_116420 0.5kb upstream 0.5kb upstream 2796   true Lsat_1_v8_lg_7: 191501541-191504336 Lactuca sativa
Lsat_1_v5_gn_7_116420 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 191501541-191502040 Lactuca sativa
Lsat_1_v5_gn_7_116420 0.5kb downstream 0.5kb downstream 2796   true Lsat_1_v8_lg_7: 191502041-191504836 Lactuca sativa
Lsat_1_v5_gn_7_116420 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 191504337-191504836 Lactuca sativa
Lsat_1_v5_gn_7_116420 1.0kb upstream 1.0kb upstream 3296   true Lsat_1_v8_lg_7: 191501041-191504336 Lactuca sativa
Lsat_1_v5_gn_7_116420 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 191501041-191502040 Lactuca sativa
Lsat_1_v5_gn_7_116420 1.0kb downstream 1.0kb downstream 3296   true Lsat_1_v8_lg_7: 191502041-191505336 Lactuca sativa
Lsat_1_v5_gn_7_116420 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 191504337-191505336 Lactuca sativa
Lsat_1_v5_gn_7_116420 2.0kb upstream 2.0kb upstream 4296   true Lsat_1_v8_lg_7: 191500041-191504336 Lactuca sativa
Lsat_1_v5_gn_7_116420 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 191500041-191502040 Lactuca sativa
Lsat_1_v5_gn_7_116420 2.0kb downstream 2.0kb downstream 4296   true Lsat_1_v8_lg_7: 191502041-191506336 Lactuca sativa
Lsat_1_v5_gn_7_116420 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 191504337-191506336 Lactuca sativa
Lsat_1_v5_gn_7_116420 5.0kb upstream 5.0kb upstream 7296   true Lsat_1_v8_lg_7: 191497041-191504336 Lactuca sativa
Lsat_1_v5_gn_7_116420 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 191497041-191502040 Lactuca sativa
Lsat_1_v5_gn_7_116420 5.0kb downstream 5.0kb downstream 7296   true Lsat_1_v8_lg_7: 191502041-191509336 Lactuca sativa
Lsat_1_v5_gn_7_116420 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 191504337-191509336 Lactuca sativa
Lsat_1_v5_gn_7_116420 10.0kb upstream 10.0kb upstream 12296   true Lsat_1_v8_lg_7: 191492041-191504336 Lactuca sativa
Lsat_1_v5_gn_7_116420 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 191492041-191502040 Lactuca sativa
Lsat_1_v5_gn_7_116420 10.0kb downstream 10.0kb downstream 12296   true Lsat_1_v8_lg_7: 191502041-191514336 Lactuca sativa
Lsat_1_v5_gn_7_116420 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 191504337-191514336 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480488 5263 Asterids View MSA
123741711 5271 Pentapetalae View MSA
122788535 5272 Eudicot View MSA
122049944 5273 Angiosperm View MSA
123429067 5275 Viridiplantae View MSA
121350989 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain