Gene : Lsat_1_v5_gn_7_52180 L. sativa V8
Defline:  (1 of 5) PTHR22595//PTHR22595:SF33 - CHITINASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1650
Name:  ? Lsat_1_v5_gn_7_52180 Secondary Identifier:  ? PAC:38911104
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_52180 0.5kb upstream 0.5kb upstream 1341   true Lsat_1_v8_lg_7: 71978648-71979988 Lactuca sativa
Lsat_1_v5_gn_7_52180 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 71978648-71979147 Lactuca sativa
Lsat_1_v5_gn_7_52180 0.5kb downstream 0.5kb downstream 1341   true Lsat_1_v8_lg_7: 71979148-71980488 Lactuca sativa
Lsat_1_v5_gn_7_52180 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 71979989-71980488 Lactuca sativa
Lsat_1_v5_gn_7_52180 1.0kb upstream 1.0kb upstream 1841   true Lsat_1_v8_lg_7: 71978148-71979988 Lactuca sativa
Lsat_1_v5_gn_7_52180 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 71978148-71979147 Lactuca sativa
Lsat_1_v5_gn_7_52180 1.0kb downstream 1.0kb downstream 1841   true Lsat_1_v8_lg_7: 71979148-71980988 Lactuca sativa
Lsat_1_v5_gn_7_52180 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 71979989-71980988 Lactuca sativa
Lsat_1_v5_gn_7_52180 2.0kb upstream 2.0kb upstream 2841   true Lsat_1_v8_lg_7: 71977148-71979988 Lactuca sativa
Lsat_1_v5_gn_7_52180 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 71977148-71979147 Lactuca sativa
Lsat_1_v5_gn_7_52180 2.0kb downstream 2.0kb downstream 2841   true Lsat_1_v8_lg_7: 71979148-71981988 Lactuca sativa
Lsat_1_v5_gn_7_52180 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 71979989-71981988 Lactuca sativa
Lsat_1_v5_gn_7_52180 5.0kb upstream 5.0kb upstream 5841   true Lsat_1_v8_lg_7: 71974148-71979988 Lactuca sativa
Lsat_1_v5_gn_7_52180 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 71974148-71979147 Lactuca sativa
Lsat_1_v5_gn_7_52180 5.0kb downstream 5.0kb downstream 5841   true Lsat_1_v8_lg_7: 71979148-71984988 Lactuca sativa
Lsat_1_v5_gn_7_52180 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 71979989-71984988 Lactuca sativa
Lsat_1_v5_gn_7_52180 10.0kb upstream 10.0kb upstream 10841   true Lsat_1_v8_lg_7: 71969148-71979988 Lactuca sativa
Lsat_1_v5_gn_7_52180 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 71969148-71979147 Lactuca sativa
Lsat_1_v5_gn_7_52180 10.0kb downstream 10.0kb downstream 10841   true Lsat_1_v8_lg_7: 71979148-71989988 Lactuca sativa
Lsat_1_v5_gn_7_52180 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 71979989-71989988 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476739 5263 Asterids View MSA
123752466 5271 Pentapetalae View MSA
122795564 5272 Eudicot View MSA
122051117 5273 Angiosperm View MSA
121350536 5274 Embryophyte View MSA
123381778 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain