Gene : Lsat_1_v5_gn_7_70001 L. sativa V8
Defline:  (1 of 1) PTHR11061//PTHR11061:SF12 - RNA M5U METHYLTRANSFERASE FAMILY // RNA BINDING PROTEIN-RELATED Genomic Order:  2088
Name:  ? Lsat_1_v5_gn_7_70001 Secondary Identifier:  ? PAC:38910025
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_70001 0.5kb upstream 0.5kb upstream 2972   true Lsat_1_v8_lg_7: 106123218-106126189 Lactuca sativa
Lsat_1_v5_gn_7_70001 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 106125690-106126189 Lactuca sativa
Lsat_1_v5_gn_7_70001 0.5kb downstream 0.5kb downstream 2972   true Lsat_1_v8_lg_7: 106122718-106125689 Lactuca sativa
Lsat_1_v5_gn_7_70001 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 106122718-106123217 Lactuca sativa
Lsat_1_v5_gn_7_70001 1.0kb upstream 1.0kb upstream 3472   true Lsat_1_v8_lg_7: 106123218-106126689 Lactuca sativa
Lsat_1_v5_gn_7_70001 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 106125690-106126689 Lactuca sativa
Lsat_1_v5_gn_7_70001 1.0kb downstream 1.0kb downstream 3472   true Lsat_1_v8_lg_7: 106122218-106125689 Lactuca sativa
Lsat_1_v5_gn_7_70001 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 106122218-106123217 Lactuca sativa
Lsat_1_v5_gn_7_70001 2.0kb upstream 2.0kb upstream 4472   true Lsat_1_v8_lg_7: 106123218-106127689 Lactuca sativa
Lsat_1_v5_gn_7_70001 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 106125690-106127689 Lactuca sativa
Lsat_1_v5_gn_7_70001 2.0kb downstream 2.0kb downstream 4472   true Lsat_1_v8_lg_7: 106121218-106125689 Lactuca sativa
Lsat_1_v5_gn_7_70001 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 106121218-106123217 Lactuca sativa
Lsat_1_v5_gn_7_70001 5.0kb upstream 5.0kb upstream 7472   true Lsat_1_v8_lg_7: 106123218-106130689 Lactuca sativa
Lsat_1_v5_gn_7_70001 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 106125690-106130689 Lactuca sativa
Lsat_1_v5_gn_7_70001 5.0kb downstream 5.0kb downstream 7472   true Lsat_1_v8_lg_7: 106118218-106125689 Lactuca sativa
Lsat_1_v5_gn_7_70001 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 106118218-106123217 Lactuca sativa
Lsat_1_v5_gn_7_70001 10.0kb upstream 10.0kb upstream 12472   true Lsat_1_v8_lg_7: 106123218-106135689 Lactuca sativa
Lsat_1_v5_gn_7_70001 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 106125690-106135689 Lactuca sativa
Lsat_1_v5_gn_7_70001 10.0kb downstream 10.0kb downstream 12472   true Lsat_1_v8_lg_7: 106113218-106125689 Lactuca sativa
Lsat_1_v5_gn_7_70001 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 106113218-106123217 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472839 5263 Asterids View MSA
123739745 5271 Pentapetalae View MSA
122788852 5272 Eudicot View MSA
122042200 5273 Angiosperm View MSA
121348163 5274 Embryophyte View MSA
123426103 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain