Gene : Lsat_1_v5_gn_7_39141 L. sativa V8
Defline:  (1 of 2) PTHR10509//PTHR10509:SF29 - O-METHYLTRANSFERASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1243
Name:  ? Lsat_1_v5_gn_7_39141 Secondary Identifier:  ? PAC:38913006
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-1121 Lactuca sativa pathologic  
Lsativa PWY-361 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_39141 0.5kb upstream 0.5kb upstream 4045   true Lsat_1_v8_lg_7: 52119352-52123396 Lactuca sativa
Lsat_1_v5_gn_7_39141 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 52122897-52123396 Lactuca sativa
Lsat_1_v5_gn_7_39141 0.5kb downstream 0.5kb downstream 4045   true Lsat_1_v8_lg_7: 52118852-52122896 Lactuca sativa
Lsat_1_v5_gn_7_39141 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 52118852-52119351 Lactuca sativa
Lsat_1_v5_gn_7_39141 1.0kb upstream 1.0kb upstream 4545   true Lsat_1_v8_lg_7: 52119352-52123896 Lactuca sativa
Lsat_1_v5_gn_7_39141 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 52122897-52123896 Lactuca sativa
Lsat_1_v5_gn_7_39141 1.0kb downstream 1.0kb downstream 4545   true Lsat_1_v8_lg_7: 52118352-52122896 Lactuca sativa
Lsat_1_v5_gn_7_39141 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 52118352-52119351 Lactuca sativa
Lsat_1_v5_gn_7_39141 2.0kb upstream 2.0kb upstream 5545   true Lsat_1_v8_lg_7: 52119352-52124896 Lactuca sativa
Lsat_1_v5_gn_7_39141 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 52122897-52124896 Lactuca sativa
Lsat_1_v5_gn_7_39141 2.0kb downstream 2.0kb downstream 5545   true Lsat_1_v8_lg_7: 52117352-52122896 Lactuca sativa
Lsat_1_v5_gn_7_39141 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 52117352-52119351 Lactuca sativa
Lsat_1_v5_gn_7_39141 5.0kb upstream 5.0kb upstream 8545   true Lsat_1_v8_lg_7: 52119352-52127896 Lactuca sativa
Lsat_1_v5_gn_7_39141 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 52122897-52127896 Lactuca sativa
Lsat_1_v5_gn_7_39141 5.0kb downstream 5.0kb downstream 8545   true Lsat_1_v8_lg_7: 52114352-52122896 Lactuca sativa
Lsat_1_v5_gn_7_39141 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 52114352-52119351 Lactuca sativa
Lsat_1_v5_gn_7_39141 10.0kb upstream 10.0kb upstream 13545   true Lsat_1_v8_lg_7: 52119352-52132896 Lactuca sativa
Lsat_1_v5_gn_7_39141 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 52122897-52132896 Lactuca sativa
Lsat_1_v5_gn_7_39141 10.0kb downstream 10.0kb downstream 13545   true Lsat_1_v8_lg_7: 52109352-52122896 Lactuca sativa
Lsat_1_v5_gn_7_39141 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 52109352-52119351 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478420 5263 Asterids View MSA
123751667 5271 Pentapetalae View MSA
122774127 5272 Eudicot View MSA
122050348 5273 Angiosperm View MSA
121311864 5274 Embryophyte View MSA
123427843 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain