Gene : Lsat_1_v5_gn_7_42681 L. sativa V8
Defline:  (1 of 1) PTHR31003//PTHR31003:SF3 - MYB FAMILY TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED Genomic Order:  1381
Name:  ? Lsat_1_v5_gn_7_42681 Secondary Identifier:  ? PAC:38914527
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_42681 0.5kb upstream 0.5kb upstream 3293   true Lsat_1_v8_lg_7: 59338861-59342153 Lactuca sativa
Lsat_1_v5_gn_7_42681 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 59338861-59339360 Lactuca sativa
Lsat_1_v5_gn_7_42681 0.5kb downstream 0.5kb downstream 3293   true Lsat_1_v8_lg_7: 59339361-59342653 Lactuca sativa
Lsat_1_v5_gn_7_42681 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 59342154-59342653 Lactuca sativa
Lsat_1_v5_gn_7_42681 1.0kb upstream 1.0kb upstream 3793   true Lsat_1_v8_lg_7: 59338361-59342153 Lactuca sativa
Lsat_1_v5_gn_7_42681 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 59338361-59339360 Lactuca sativa
Lsat_1_v5_gn_7_42681 1.0kb downstream 1.0kb downstream 3793   true Lsat_1_v8_lg_7: 59339361-59343153 Lactuca sativa
Lsat_1_v5_gn_7_42681 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 59342154-59343153 Lactuca sativa
Lsat_1_v5_gn_7_42681 2.0kb upstream 2.0kb upstream 4793   true Lsat_1_v8_lg_7: 59337361-59342153 Lactuca sativa
Lsat_1_v5_gn_7_42681 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 59337361-59339360 Lactuca sativa
Lsat_1_v5_gn_7_42681 2.0kb downstream 2.0kb downstream 4793   true Lsat_1_v8_lg_7: 59339361-59344153 Lactuca sativa
Lsat_1_v5_gn_7_42681 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 59342154-59344153 Lactuca sativa
Lsat_1_v5_gn_7_42681 5.0kb upstream 5.0kb upstream 7793   true Lsat_1_v8_lg_7: 59334361-59342153 Lactuca sativa
Lsat_1_v5_gn_7_42681 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 59334361-59339360 Lactuca sativa
Lsat_1_v5_gn_7_42681 5.0kb downstream 5.0kb downstream 7793   true Lsat_1_v8_lg_7: 59339361-59347153 Lactuca sativa
Lsat_1_v5_gn_7_42681 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 59342154-59347153 Lactuca sativa
Lsat_1_v5_gn_7_42681 10.0kb upstream 10.0kb upstream 12793   true Lsat_1_v8_lg_7: 59329361-59342153 Lactuca sativa
Lsat_1_v5_gn_7_42681 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 59329361-59339360 Lactuca sativa
Lsat_1_v5_gn_7_42681 10.0kb downstream 10.0kb downstream 12793   true Lsat_1_v8_lg_7: 59339361-59352153 Lactuca sativa
Lsat_1_v5_gn_7_42681 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 59342154-59352153 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481656 5263 Asterids View MSA
123741348 5271 Pentapetalae View MSA
122789527 5272 Eudicot View MSA
122049766 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121350891 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain