Gene : Lsat_1_v5_gn_8_103640 L. sativa V8
Defline:  (1 of 3) K01881 - prolyl-tRNA synthetase (PARS, proS) Genomic Order:  3256
Name:  ? Lsat_1_v5_gn_8_103640 Secondary Identifier:  ? PAC:38953150
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa TRNA-CHARGING-PWY Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_103640 0.5kb upstream 0.5kb upstream 4625   true Lsat_1_v8_lg_8: 157065202-157069826 Lactuca sativa
Lsat_1_v5_gn_8_103640 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 157065202-157065701 Lactuca sativa
Lsat_1_v5_gn_8_103640 0.5kb downstream 0.5kb downstream 4625   true Lsat_1_v8_lg_8: 157065702-157070326 Lactuca sativa
Lsat_1_v5_gn_8_103640 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 157069827-157070326 Lactuca sativa
Lsat_1_v5_gn_8_103640 1.0kb upstream 1.0kb upstream 5125   true Lsat_1_v8_lg_8: 157064702-157069826 Lactuca sativa
Lsat_1_v5_gn_8_103640 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 157064702-157065701 Lactuca sativa
Lsat_1_v5_gn_8_103640 1.0kb downstream 1.0kb downstream 5125   true Lsat_1_v8_lg_8: 157065702-157070826 Lactuca sativa
Lsat_1_v5_gn_8_103640 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 157069827-157070826 Lactuca sativa
Lsat_1_v5_gn_8_103640 2.0kb upstream 2.0kb upstream 6125   true Lsat_1_v8_lg_8: 157063702-157069826 Lactuca sativa
Lsat_1_v5_gn_8_103640 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 157063702-157065701 Lactuca sativa
Lsat_1_v5_gn_8_103640 2.0kb downstream 2.0kb downstream 6125   true Lsat_1_v8_lg_8: 157065702-157071826 Lactuca sativa
Lsat_1_v5_gn_8_103640 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 157069827-157071826 Lactuca sativa
Lsat_1_v5_gn_8_103640 5.0kb upstream 5.0kb upstream 9125   true Lsat_1_v8_lg_8: 157060702-157069826 Lactuca sativa
Lsat_1_v5_gn_8_103640 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 157060702-157065701 Lactuca sativa
Lsat_1_v5_gn_8_103640 5.0kb downstream 5.0kb downstream 9125   true Lsat_1_v8_lg_8: 157065702-157074826 Lactuca sativa
Lsat_1_v5_gn_8_103640 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 157069827-157074826 Lactuca sativa
Lsat_1_v5_gn_8_103640 10.0kb upstream 10.0kb upstream 14125   true Lsat_1_v8_lg_8: 157055702-157069826 Lactuca sativa
Lsat_1_v5_gn_8_103640 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 157055702-157065701 Lactuca sativa
Lsat_1_v5_gn_8_103640 10.0kb downstream 10.0kb downstream 14125   true Lsat_1_v8_lg_8: 157065702-157079826 Lactuca sativa
Lsat_1_v5_gn_8_103640 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 157069827-157079826 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471535 5263 Asterids View MSA
123739091 5271 Pentapetalae View MSA
122787738 5272 Eudicot View MSA
122046547 5273 Angiosperm View MSA
121346675 5274 Embryophyte View MSA
123428629 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain