Gene : Lsat_1_v5_gn_8_104101 L. sativa V8
Defline:  (1 of 3) PTHR12902:SF12 - PROTEIN SCAR2-RELATED Genomic Order:  3271
Name:  ? Lsat_1_v5_gn_8_104101 Secondary Identifier:  ? PAC:38950183
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_104101 0.5kb upstream 0.5kb upstream 5683   true Lsat_1_v8_lg_8: 157507703-157513385 Lactuca sativa
Lsat_1_v5_gn_8_104101 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 157512886-157513385 Lactuca sativa
Lsat_1_v5_gn_8_104101 0.5kb downstream 0.5kb downstream 5683   true Lsat_1_v8_lg_8: 157507203-157512885 Lactuca sativa
Lsat_1_v5_gn_8_104101 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 157507203-157507702 Lactuca sativa
Lsat_1_v5_gn_8_104101 1.0kb upstream 1.0kb upstream 6183   true Lsat_1_v8_lg_8: 157507703-157513885 Lactuca sativa
Lsat_1_v5_gn_8_104101 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 157512886-157513885 Lactuca sativa
Lsat_1_v5_gn_8_104101 1.0kb downstream 1.0kb downstream 6183   true Lsat_1_v8_lg_8: 157506703-157512885 Lactuca sativa
Lsat_1_v5_gn_8_104101 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 157506703-157507702 Lactuca sativa
Lsat_1_v5_gn_8_104101 2.0kb upstream 2.0kb upstream 7183   true Lsat_1_v8_lg_8: 157507703-157514885 Lactuca sativa
Lsat_1_v5_gn_8_104101 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 157512886-157514885 Lactuca sativa
Lsat_1_v5_gn_8_104101 2.0kb downstream 2.0kb downstream 7183   true Lsat_1_v8_lg_8: 157505703-157512885 Lactuca sativa
Lsat_1_v5_gn_8_104101 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 157505703-157507702 Lactuca sativa
Lsat_1_v5_gn_8_104101 5.0kb upstream 5.0kb upstream 10183   true Lsat_1_v8_lg_8: 157507703-157517885 Lactuca sativa
Lsat_1_v5_gn_8_104101 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 157512886-157517885 Lactuca sativa
Lsat_1_v5_gn_8_104101 5.0kb downstream 5.0kb downstream 10183   true Lsat_1_v8_lg_8: 157502703-157512885 Lactuca sativa
Lsat_1_v5_gn_8_104101 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 157502703-157507702 Lactuca sativa
Lsat_1_v5_gn_8_104101 10.0kb upstream 10.0kb upstream 15183   true Lsat_1_v8_lg_8: 157507703-157522885 Lactuca sativa
Lsat_1_v5_gn_8_104101 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 157512886-157522885 Lactuca sativa
Lsat_1_v5_gn_8_104101 10.0kb downstream 10.0kb downstream 15183   true Lsat_1_v8_lg_8: 157497703-157512885 Lactuca sativa
Lsat_1_v5_gn_8_104101 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 157497703-157507702 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121447989 5263 Asterids Singleton cluster - no MSA
123743804 5271 Pentapetalae View MSA
122797754 5272 Eudicot View MSA
122043443 5273 Angiosperm View MSA
121351143 5274 Embryophyte View MSA
123382024 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain