Gene : Lsat_1_v5_gn_8_147640 L. sativa V8
Defline:  (1 of 1) PTHR12210//PTHR12210:SF13 - NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED // CTD SMALL PHOSPHATASE-LIKE PROTEIN 2 Genomic Order:  4412
Name:  ? Lsat_1_v5_gn_8_147640 Secondary Identifier:  ? PAC:38954769
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_147640 0.5kb upstream 0.5kb upstream 4182   true Lsat_1_v8_lg_8: 252001329-252005510 Lactuca sativa
Lsat_1_v5_gn_8_147640 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 252005011-252005510 Lactuca sativa
Lsat_1_v5_gn_8_147640 0.5kb downstream 0.5kb downstream 4182   true Lsat_1_v8_lg_8: 252000829-252005010 Lactuca sativa
Lsat_1_v5_gn_8_147640 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 252000829-252001328 Lactuca sativa
Lsat_1_v5_gn_8_147640 1.0kb upstream 1.0kb upstream 4682   true Lsat_1_v8_lg_8: 252001329-252006010 Lactuca sativa
Lsat_1_v5_gn_8_147640 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 252005011-252006010 Lactuca sativa
Lsat_1_v5_gn_8_147640 1.0kb downstream 1.0kb downstream 4682   true Lsat_1_v8_lg_8: 252000329-252005010 Lactuca sativa
Lsat_1_v5_gn_8_147640 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 252000329-252001328 Lactuca sativa
Lsat_1_v5_gn_8_147640 2.0kb upstream 2.0kb upstream 5682   true Lsat_1_v8_lg_8: 252001329-252007010 Lactuca sativa
Lsat_1_v5_gn_8_147640 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 252005011-252007010 Lactuca sativa
Lsat_1_v5_gn_8_147640 2.0kb downstream 2.0kb downstream 5682   true Lsat_1_v8_lg_8: 251999329-252005010 Lactuca sativa
Lsat_1_v5_gn_8_147640 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 251999329-252001328 Lactuca sativa
Lsat_1_v5_gn_8_147640 5.0kb upstream 5.0kb upstream 8682   true Lsat_1_v8_lg_8: 252001329-252010010 Lactuca sativa
Lsat_1_v5_gn_8_147640 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 252005011-252010010 Lactuca sativa
Lsat_1_v5_gn_8_147640 5.0kb downstream 5.0kb downstream 8682   true Lsat_1_v8_lg_8: 251996329-252005010 Lactuca sativa
Lsat_1_v5_gn_8_147640 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 251996329-252001328 Lactuca sativa
Lsat_1_v5_gn_8_147640 10.0kb upstream 10.0kb upstream 13682   true Lsat_1_v8_lg_8: 252001329-252015010 Lactuca sativa
Lsat_1_v5_gn_8_147640 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 252005011-252015010 Lactuca sativa
Lsat_1_v5_gn_8_147640 10.0kb downstream 10.0kb downstream 13682   true Lsat_1_v8_lg_8: 251991329-252005010 Lactuca sativa
Lsat_1_v5_gn_8_147640 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 251991329-252001328 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466202 5263 Asterids View MSA
123745069 5271 Pentapetalae View MSA
122794821 5272 Eudicot View MSA
122048249 5273 Angiosperm View MSA
123429149 5275 Viridiplantae View MSA
121310904 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain