Gene : Lsat_1_v5_gn_8_114360 L. sativa V8
Defline:  (1 of 1) PTHR23336//PTHR23336:SF11 - ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. // SUBFAMILY NOT NAMED Genomic Order:  3493
Name:  ? Lsat_1_v5_gn_8_114360 Secondary Identifier:  ? PAC:38954224
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_114360 0.5kb upstream 0.5kb upstream 13034   true Lsat_1_v8_lg_8: 173580873-173593906 Lactuca sativa
Lsat_1_v5_gn_8_114360 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 173593407-173593906 Lactuca sativa
Lsat_1_v5_gn_8_114360 0.5kb downstream 0.5kb downstream 13034   true Lsat_1_v8_lg_8: 173580373-173593406 Lactuca sativa
Lsat_1_v5_gn_8_114360 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 173580373-173580872 Lactuca sativa
Lsat_1_v5_gn_8_114360 1.0kb upstream 1.0kb upstream 13534   true Lsat_1_v8_lg_8: 173580873-173594406 Lactuca sativa
Lsat_1_v5_gn_8_114360 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 173593407-173594406 Lactuca sativa
Lsat_1_v5_gn_8_114360 1.0kb downstream 1.0kb downstream 13534   true Lsat_1_v8_lg_8: 173579873-173593406 Lactuca sativa
Lsat_1_v5_gn_8_114360 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 173579873-173580872 Lactuca sativa
Lsat_1_v5_gn_8_114360 2.0kb upstream 2.0kb upstream 14534   true Lsat_1_v8_lg_8: 173580873-173595406 Lactuca sativa
Lsat_1_v5_gn_8_114360 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 173593407-173595406 Lactuca sativa
Lsat_1_v5_gn_8_114360 2.0kb downstream 2.0kb downstream 14534   true Lsat_1_v8_lg_8: 173578873-173593406 Lactuca sativa
Lsat_1_v5_gn_8_114360 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 173578873-173580872 Lactuca sativa
Lsat_1_v5_gn_8_114360 5.0kb upstream 5.0kb upstream 17534   true Lsat_1_v8_lg_8: 173580873-173598406 Lactuca sativa
Lsat_1_v5_gn_8_114360 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 173593407-173598406 Lactuca sativa
Lsat_1_v5_gn_8_114360 5.0kb downstream 5.0kb downstream 17534   true Lsat_1_v8_lg_8: 173575873-173593406 Lactuca sativa
Lsat_1_v5_gn_8_114360 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 173575873-173580872 Lactuca sativa
Lsat_1_v5_gn_8_114360 10.0kb upstream 10.0kb upstream 22534   true Lsat_1_v8_lg_8: 173580873-173603406 Lactuca sativa
Lsat_1_v5_gn_8_114360 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 173593407-173603406 Lactuca sativa
Lsat_1_v5_gn_8_114360 10.0kb downstream 10.0kb downstream 22534   true Lsat_1_v8_lg_8: 173570873-173593406 Lactuca sativa
Lsat_1_v5_gn_8_114360 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 173570873-173580872 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026758 5273 Angiosperm View MSA
121475893 5263 Asterids View MSA
123742338 5271 Pentapetalae View MSA
122794661 5272 Eudicot View MSA
121351262 5274 Embryophyte View MSA
123382083 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain