Gene : Lsat_1_v5_gn_8_114921 L. sativa V8
Defline:  (1 of 2) K12627 - U6 snRNA-associated Sm-like protein LSm8 (LSM8) Genomic Order:  3528
Name:  ? Lsat_1_v5_gn_8_114921 Secondary Identifier:  ? PAC:38951042
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_114921 0.5kb upstream 0.5kb upstream 3518   true Lsat_1_v8_lg_8: 175754234-175757751 Lactuca sativa
Lsat_1_v5_gn_8_114921 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 175754234-175754733 Lactuca sativa
Lsat_1_v5_gn_8_114921 0.5kb downstream 0.5kb downstream 3518   true Lsat_1_v8_lg_8: 175754734-175758251 Lactuca sativa
Lsat_1_v5_gn_8_114921 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 175757752-175758251 Lactuca sativa
Lsat_1_v5_gn_8_114921 1.0kb upstream 1.0kb upstream 4018   true Lsat_1_v8_lg_8: 175753734-175757751 Lactuca sativa
Lsat_1_v5_gn_8_114921 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 175753734-175754733 Lactuca sativa
Lsat_1_v5_gn_8_114921 1.0kb downstream 1.0kb downstream 4018   true Lsat_1_v8_lg_8: 175754734-175758751 Lactuca sativa
Lsat_1_v5_gn_8_114921 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 175757752-175758751 Lactuca sativa
Lsat_1_v5_gn_8_114921 2.0kb upstream 2.0kb upstream 5018   true Lsat_1_v8_lg_8: 175752734-175757751 Lactuca sativa
Lsat_1_v5_gn_8_114921 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 175752734-175754733 Lactuca sativa
Lsat_1_v5_gn_8_114921 2.0kb downstream 2.0kb downstream 5018   true Lsat_1_v8_lg_8: 175754734-175759751 Lactuca sativa
Lsat_1_v5_gn_8_114921 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 175757752-175759751 Lactuca sativa
Lsat_1_v5_gn_8_114921 5.0kb upstream 5.0kb upstream 8018   true Lsat_1_v8_lg_8: 175749734-175757751 Lactuca sativa
Lsat_1_v5_gn_8_114921 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 175749734-175754733 Lactuca sativa
Lsat_1_v5_gn_8_114921 5.0kb downstream 5.0kb downstream 8018   true Lsat_1_v8_lg_8: 175754734-175762751 Lactuca sativa
Lsat_1_v5_gn_8_114921 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 175757752-175762751 Lactuca sativa
Lsat_1_v5_gn_8_114921 10.0kb upstream 10.0kb upstream 13018   true Lsat_1_v8_lg_8: 175744734-175757751 Lactuca sativa
Lsat_1_v5_gn_8_114921 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 175744734-175754733 Lactuca sativa
Lsat_1_v5_gn_8_114921 10.0kb downstream 10.0kb downstream 13018   true Lsat_1_v8_lg_8: 175754734-175767751 Lactuca sativa
Lsat_1_v5_gn_8_114921 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 175757752-175767751 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481969 5263 Asterids View MSA
123746583 5271 Pentapetalae View MSA
122790911 5272 Eudicot View MSA
122047376 5273 Angiosperm View MSA
121345088 5274 Embryophyte View MSA
123423767 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain