Gene : Lsat_1_v5_gn_8_121220 L. sativa V8
Defline:  (1 of 7) PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  3665
Name:  ? Lsat_1_v5_gn_8_121220 Secondary Identifier:  ? PAC:38948966
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_121220 0.5kb upstream 0.5kb upstream 2743   true Lsat_1_v8_lg_8: 183998669-184001411 Lactuca sativa
Lsat_1_v5_gn_8_121220 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 184000912-184001411 Lactuca sativa
Lsat_1_v5_gn_8_121220 0.5kb downstream 0.5kb downstream 2743   true Lsat_1_v8_lg_8: 183998169-184000911 Lactuca sativa
Lsat_1_v5_gn_8_121220 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 183998169-183998668 Lactuca sativa
Lsat_1_v5_gn_8_121220 1.0kb upstream 1.0kb upstream 3243   true Lsat_1_v8_lg_8: 183998669-184001911 Lactuca sativa
Lsat_1_v5_gn_8_121220 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 184000912-184001911 Lactuca sativa
Lsat_1_v5_gn_8_121220 1.0kb downstream 1.0kb downstream 3243   true Lsat_1_v8_lg_8: 183997669-184000911 Lactuca sativa
Lsat_1_v5_gn_8_121220 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 183997669-183998668 Lactuca sativa
Lsat_1_v5_gn_8_121220 2.0kb upstream 2.0kb upstream 4243   true Lsat_1_v8_lg_8: 183998669-184002911 Lactuca sativa
Lsat_1_v5_gn_8_121220 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 184000912-184002911 Lactuca sativa
Lsat_1_v5_gn_8_121220 2.0kb downstream 2.0kb downstream 4243   true Lsat_1_v8_lg_8: 183996669-184000911 Lactuca sativa
Lsat_1_v5_gn_8_121220 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 183996669-183998668 Lactuca sativa
Lsat_1_v5_gn_8_121220 5.0kb upstream 5.0kb upstream 7243   true Lsat_1_v8_lg_8: 183998669-184005911 Lactuca sativa
Lsat_1_v5_gn_8_121220 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 184000912-184005911 Lactuca sativa
Lsat_1_v5_gn_8_121220 5.0kb downstream 5.0kb downstream 7243   true Lsat_1_v8_lg_8: 183993669-184000911 Lactuca sativa
Lsat_1_v5_gn_8_121220 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 183993669-183998668 Lactuca sativa
Lsat_1_v5_gn_8_121220 10.0kb upstream 10.0kb upstream 12243   true Lsat_1_v8_lg_8: 183998669-184010911 Lactuca sativa
Lsat_1_v5_gn_8_121220 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 184000912-184010911 Lactuca sativa
Lsat_1_v5_gn_8_121220 10.0kb downstream 10.0kb downstream 12243   true Lsat_1_v8_lg_8: 183988669-184000911 Lactuca sativa
Lsat_1_v5_gn_8_121220 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 183988669-183998668 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469907 5263 Asterids View MSA
123738274 5271 Pentapetalae View MSA
122790964 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain