Gene : Lsat_1_v5_gn_8_122660 L. sativa V8

Defline:  (1 of 2) 2.1.1.142//2.1.1.143 - Cycloartenol 24-C-methyltransferase / Sterol C-methyltransferase // 24-methylenesterol C-methyltransferase / SMT(2) Genomic Order:  3741
Name:  ? Lsat_1_v5_gn_8_122660 Secondary Identifier:  ? PAC:38949339

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-2541 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_122660 0.5kb upstream 0.5kb upstream 1868   true Lsat_1_v8_lg_8: 189276285-189278152 Lactuca sativa
Lsat_1_v5_gn_8_122660 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 189276285-189276784 Lactuca sativa
Lsat_1_v5_gn_8_122660 0.5kb downstream 0.5kb downstream 1868   true Lsat_1_v8_lg_8: 189276785-189278652 Lactuca sativa
Lsat_1_v5_gn_8_122660 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 189278153-189278652 Lactuca sativa
Lsat_1_v5_gn_8_122660 1.0kb upstream 1.0kb upstream 2368   true Lsat_1_v8_lg_8: 189275785-189278152 Lactuca sativa
Lsat_1_v5_gn_8_122660 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 189275785-189276784 Lactuca sativa
Lsat_1_v5_gn_8_122660 1.0kb downstream 1.0kb downstream 2368   true Lsat_1_v8_lg_8: 189276785-189279152 Lactuca sativa
Lsat_1_v5_gn_8_122660 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 189278153-189279152 Lactuca sativa
Lsat_1_v5_gn_8_122660 2.0kb upstream 2.0kb upstream 3368   true Lsat_1_v8_lg_8: 189274785-189278152 Lactuca sativa
Lsat_1_v5_gn_8_122660 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 189274785-189276784 Lactuca sativa
Lsat_1_v5_gn_8_122660 2.0kb downstream 2.0kb downstream 3368   true Lsat_1_v8_lg_8: 189276785-189280152 Lactuca sativa
Lsat_1_v5_gn_8_122660 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 189278153-189280152 Lactuca sativa
Lsat_1_v5_gn_8_122660 5.0kb upstream 5.0kb upstream 6368   true Lsat_1_v8_lg_8: 189271785-189278152 Lactuca sativa
Lsat_1_v5_gn_8_122660 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 189271785-189276784 Lactuca sativa
Lsat_1_v5_gn_8_122660 5.0kb downstream 5.0kb downstream 6368   true Lsat_1_v8_lg_8: 189276785-189283152 Lactuca sativa
Lsat_1_v5_gn_8_122660 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 189278153-189283152 Lactuca sativa
Lsat_1_v5_gn_8_122660 10.0kb upstream 10.0kb upstream 11368   true Lsat_1_v8_lg_8: 189266785-189278152 Lactuca sativa
Lsat_1_v5_gn_8_122660 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 189266785-189276784 Lactuca sativa
Lsat_1_v5_gn_8_122660 10.0kb downstream 10.0kb downstream 11368   true Lsat_1_v8_lg_8: 189276785-189288152 Lactuca sativa
Lsat_1_v5_gn_8_122660 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 189278153-189288152 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470793 5263 Asterids View MSA
123749878 5271 Pentapetalae View MSA
122793633 5272 Eudicot View MSA
122047271 5273 Angiosperm View MSA
121344259 5274 Embryophyte View MSA
123426805 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain