Gene : Lsat_1_v5_gn_8_126780 L. sativa V8
Defline:  (1 of 1) PTHR34574//PTHR34574:SF2 - FAMILY NOT NAMED // EF-HAND CONTAINING PROTEIN-LIKE Genomic Order:  3843
Name:  ? Lsat_1_v5_gn_8_126780 Secondary Identifier:  ? PAC:38950573
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_126780 0.5kb upstream 0.5kb upstream 4395   true Lsat_1_v8_lg_8: 195831905-195836299 Lactuca sativa
Lsat_1_v5_gn_8_126780 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 195835800-195836299 Lactuca sativa
Lsat_1_v5_gn_8_126780 0.5kb downstream 0.5kb downstream 4395   true Lsat_1_v8_lg_8: 195831405-195835799 Lactuca sativa
Lsat_1_v5_gn_8_126780 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 195831405-195831904 Lactuca sativa
Lsat_1_v5_gn_8_126780 1.0kb upstream 1.0kb upstream 4895   true Lsat_1_v8_lg_8: 195831905-195836799 Lactuca sativa
Lsat_1_v5_gn_8_126780 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 195835800-195836799 Lactuca sativa
Lsat_1_v5_gn_8_126780 1.0kb downstream 1.0kb downstream 4895   true Lsat_1_v8_lg_8: 195830905-195835799 Lactuca sativa
Lsat_1_v5_gn_8_126780 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 195830905-195831904 Lactuca sativa
Lsat_1_v5_gn_8_126780 2.0kb upstream 2.0kb upstream 5895   true Lsat_1_v8_lg_8: 195831905-195837799 Lactuca sativa
Lsat_1_v5_gn_8_126780 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 195835800-195837799 Lactuca sativa
Lsat_1_v5_gn_8_126780 2.0kb downstream 2.0kb downstream 5895   true Lsat_1_v8_lg_8: 195829905-195835799 Lactuca sativa
Lsat_1_v5_gn_8_126780 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 195829905-195831904 Lactuca sativa
Lsat_1_v5_gn_8_126780 5.0kb upstream 5.0kb upstream 8895   true Lsat_1_v8_lg_8: 195831905-195840799 Lactuca sativa
Lsat_1_v5_gn_8_126780 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 195835800-195840799 Lactuca sativa
Lsat_1_v5_gn_8_126780 5.0kb downstream 5.0kb downstream 8895   true Lsat_1_v8_lg_8: 195826905-195835799 Lactuca sativa
Lsat_1_v5_gn_8_126780 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 195826905-195831904 Lactuca sativa
Lsat_1_v5_gn_8_126780 10.0kb upstream 10.0kb upstream 13895   true Lsat_1_v8_lg_8: 195831905-195845799 Lactuca sativa
Lsat_1_v5_gn_8_126780 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 195835800-195845799 Lactuca sativa
Lsat_1_v5_gn_8_126780 10.0kb downstream 10.0kb downstream 13895   true Lsat_1_v8_lg_8: 195821905-195835799 Lactuca sativa
Lsat_1_v5_gn_8_126780 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 195821905-195831904 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472650 5263 Asterids View MSA
123739646 5271 Pentapetalae View MSA
122789381 5272 Eudicot View MSA
122043203 5273 Angiosperm View MSA
121346779 5274 Embryophyte View MSA
123380443 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain