Gene : Lsat_1_v5_gn_8_126000 L. sativa V8
Defline:  (1 of 29) PF01190 - Pollen proteins Ole e I like (Pollen_Ole_e_I) Genomic Order:  3839
Name:  ? Lsat_1_v5_gn_8_126000 Secondary Identifier:  ? PAC:38952151
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_126000 0.5kb upstream 0.5kb upstream 2158   true Lsat_1_v8_lg_8: 195743027-195745184 Lactuca sativa
Lsat_1_v5_gn_8_126000 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 195743027-195743526 Lactuca sativa
Lsat_1_v5_gn_8_126000 0.5kb downstream 0.5kb downstream 2158   true Lsat_1_v8_lg_8: 195743527-195745684 Lactuca sativa
Lsat_1_v5_gn_8_126000 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 195745185-195745684 Lactuca sativa
Lsat_1_v5_gn_8_126000 1.0kb upstream 1.0kb upstream 2658   true Lsat_1_v8_lg_8: 195742527-195745184 Lactuca sativa
Lsat_1_v5_gn_8_126000 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 195742527-195743526 Lactuca sativa
Lsat_1_v5_gn_8_126000 1.0kb downstream 1.0kb downstream 2658   true Lsat_1_v8_lg_8: 195743527-195746184 Lactuca sativa
Lsat_1_v5_gn_8_126000 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 195745185-195746184 Lactuca sativa
Lsat_1_v5_gn_8_126000 2.0kb upstream 2.0kb upstream 3658   true Lsat_1_v8_lg_8: 195741527-195745184 Lactuca sativa
Lsat_1_v5_gn_8_126000 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 195741527-195743526 Lactuca sativa
Lsat_1_v5_gn_8_126000 2.0kb downstream 2.0kb downstream 3658   true Lsat_1_v8_lg_8: 195743527-195747184 Lactuca sativa
Lsat_1_v5_gn_8_126000 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 195745185-195747184 Lactuca sativa
Lsat_1_v5_gn_8_126000 5.0kb upstream 5.0kb upstream 6658   true Lsat_1_v8_lg_8: 195738527-195745184 Lactuca sativa
Lsat_1_v5_gn_8_126000 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 195738527-195743526 Lactuca sativa
Lsat_1_v5_gn_8_126000 5.0kb downstream 5.0kb downstream 6658   true Lsat_1_v8_lg_8: 195743527-195750184 Lactuca sativa
Lsat_1_v5_gn_8_126000 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 195745185-195750184 Lactuca sativa
Lsat_1_v5_gn_8_126000 10.0kb upstream 10.0kb upstream 11658   true Lsat_1_v8_lg_8: 195733527-195745184 Lactuca sativa
Lsat_1_v5_gn_8_126000 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 195733527-195743526 Lactuca sativa
Lsat_1_v5_gn_8_126000 10.0kb downstream 10.0kb downstream 11658   true Lsat_1_v8_lg_8: 195743527-195755184 Lactuca sativa
Lsat_1_v5_gn_8_126000 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 195745185-195755184 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473630 5263 Asterids View MSA
123747098 5271 Pentapetalae View MSA
122793338 5272 Eudicot View MSA
122042133 5273 Angiosperm View MSA
121349082 5274 Embryophyte View MSA
123381156 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain