Gene : Lsat_1_v5_gn_8_132861 L. sativa V8
Defline:  (1 of 1) PTHR12220//PTHR12220:SF15 - 50S/60S RIBOSOMAL PROTEIN L16 // 60S RIBOSOMAL PROTEIN L16, MITOCHONDRIAL Genomic Order:  4018
Name:  ? Lsat_1_v5_gn_8_132861 Secondary Identifier:  ? PAC:38953046
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_132861 0.5kb upstream 0.5kb upstream 1299   true Lsat_1_v8_lg_8: 212725112-212726410 Lactuca sativa
Lsat_1_v5_gn_8_132861 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 212725911-212726410 Lactuca sativa
Lsat_1_v5_gn_8_132861 0.5kb downstream 0.5kb downstream 1299   true Lsat_1_v8_lg_8: 212724612-212725910 Lactuca sativa
Lsat_1_v5_gn_8_132861 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 212724612-212725111 Lactuca sativa
Lsat_1_v5_gn_8_132861 1.0kb upstream 1.0kb upstream 1799   true Lsat_1_v8_lg_8: 212725112-212726910 Lactuca sativa
Lsat_1_v5_gn_8_132861 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 212725911-212726910 Lactuca sativa
Lsat_1_v5_gn_8_132861 1.0kb downstream 1.0kb downstream 1799   true Lsat_1_v8_lg_8: 212724112-212725910 Lactuca sativa
Lsat_1_v5_gn_8_132861 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 212724112-212725111 Lactuca sativa
Lsat_1_v5_gn_8_132861 2.0kb upstream 2.0kb upstream 2799   true Lsat_1_v8_lg_8: 212725112-212727910 Lactuca sativa
Lsat_1_v5_gn_8_132861 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 212725911-212727910 Lactuca sativa
Lsat_1_v5_gn_8_132861 2.0kb downstream 2.0kb downstream 2799   true Lsat_1_v8_lg_8: 212723112-212725910 Lactuca sativa
Lsat_1_v5_gn_8_132861 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 212723112-212725111 Lactuca sativa
Lsat_1_v5_gn_8_132861 5.0kb upstream 5.0kb upstream 5799   true Lsat_1_v8_lg_8: 212725112-212730910 Lactuca sativa
Lsat_1_v5_gn_8_132861 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 212725911-212730910 Lactuca sativa
Lsat_1_v5_gn_8_132861 5.0kb downstream 5.0kb downstream 5799   true Lsat_1_v8_lg_8: 212720112-212725910 Lactuca sativa
Lsat_1_v5_gn_8_132861 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 212720112-212725111 Lactuca sativa
Lsat_1_v5_gn_8_132861 10.0kb upstream 10.0kb upstream 10799   true Lsat_1_v8_lg_8: 212725112-212735910 Lactuca sativa
Lsat_1_v5_gn_8_132861 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 212725911-212735910 Lactuca sativa
Lsat_1_v5_gn_8_132861 10.0kb downstream 10.0kb downstream 10799   true Lsat_1_v8_lg_8: 212715112-212725910 Lactuca sativa
Lsat_1_v5_gn_8_132861 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 212715112-212725111 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480999 5263 Asterids View MSA
123748871 5271 Pentapetalae View MSA
122796002 5272 Eudicot View MSA
122041743 5273 Angiosperm View MSA
123429161 5275 Viridiplantae View MSA
121350825 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain