Gene : Lsat_1_v5_gn_8_2141 L. sativa V8
Defline:  (1 of 5) PTHR12608:SF4 - GDT1-LIKE PROTEIN 3 Genomic Order:  65
Name:  ? Lsat_1_v5_gn_8_2141 Secondary Identifier:  ? PAC:38949667
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_2141 0.5kb upstream 0.5kb upstream 3622   true Lsat_1_v8_lg_8: 3253570-3257191 Lactuca sativa
Lsat_1_v5_gn_8_2141 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 3253570-3254069 Lactuca sativa
Lsat_1_v5_gn_8_2141 0.5kb downstream 0.5kb downstream 3622   true Lsat_1_v8_lg_8: 3254070-3257691 Lactuca sativa
Lsat_1_v5_gn_8_2141 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 3257192-3257691 Lactuca sativa
Lsat_1_v5_gn_8_2141 1.0kb upstream 1.0kb upstream 4122   true Lsat_1_v8_lg_8: 3253070-3257191 Lactuca sativa
Lsat_1_v5_gn_8_2141 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 3253070-3254069 Lactuca sativa
Lsat_1_v5_gn_8_2141 1.0kb downstream 1.0kb downstream 4122   true Lsat_1_v8_lg_8: 3254070-3258191 Lactuca sativa
Lsat_1_v5_gn_8_2141 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 3257192-3258191 Lactuca sativa
Lsat_1_v5_gn_8_2141 2.0kb upstream 2.0kb upstream 5122   true Lsat_1_v8_lg_8: 3252070-3257191 Lactuca sativa
Lsat_1_v5_gn_8_2141 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 3252070-3254069 Lactuca sativa
Lsat_1_v5_gn_8_2141 2.0kb downstream 2.0kb downstream 5122   true Lsat_1_v8_lg_8: 3254070-3259191 Lactuca sativa
Lsat_1_v5_gn_8_2141 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 3257192-3259191 Lactuca sativa
Lsat_1_v5_gn_8_2141 5.0kb upstream 5.0kb upstream 8122   true Lsat_1_v8_lg_8: 3249070-3257191 Lactuca sativa
Lsat_1_v5_gn_8_2141 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 3249070-3254069 Lactuca sativa
Lsat_1_v5_gn_8_2141 5.0kb downstream 5.0kb downstream 8122   true Lsat_1_v8_lg_8: 3254070-3262191 Lactuca sativa
Lsat_1_v5_gn_8_2141 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 3257192-3262191 Lactuca sativa
Lsat_1_v5_gn_8_2141 10.0kb upstream 10.0kb upstream 13122   true Lsat_1_v8_lg_8: 3244070-3257191 Lactuca sativa
Lsat_1_v5_gn_8_2141 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 3244070-3254069 Lactuca sativa
Lsat_1_v5_gn_8_2141 10.0kb downstream 10.0kb downstream 13122   true Lsat_1_v8_lg_8: 3254070-3267191 Lactuca sativa
Lsat_1_v5_gn_8_2141 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 3257192-3267191 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479024 5263 Asterids View MSA
123740452 5271 Pentapetalae View MSA
122788674 5272 Eudicot View MSA
122047998 5273 Angiosperm View MSA
121345967 5274 Embryophyte View MSA
123428725 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain