Gene : Lsat_1_v5_gn_8_25560 L. sativa V8
Defline:  (1 of 1) K14536 - ribosome assembly protein 1 (RIA1) Genomic Order:  860
Name:  ? Lsat_1_v5_gn_8_25560 Secondary Identifier:  ? PAC:38956565
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_25560 0.5kb upstream 0.5kb upstream 3916   true Lsat_1_v8_lg_8: 32464074-32467989 Lactuca sativa
Lsat_1_v5_gn_8_25560 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 32464074-32464573 Lactuca sativa
Lsat_1_v5_gn_8_25560 0.5kb downstream 0.5kb downstream 3916   true Lsat_1_v8_lg_8: 32464574-32468489 Lactuca sativa
Lsat_1_v5_gn_8_25560 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 32467990-32468489 Lactuca sativa
Lsat_1_v5_gn_8_25560 1.0kb upstream 1.0kb upstream 4416   true Lsat_1_v8_lg_8: 32463574-32467989 Lactuca sativa
Lsat_1_v5_gn_8_25560 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 32463574-32464573 Lactuca sativa
Lsat_1_v5_gn_8_25560 1.0kb downstream 1.0kb downstream 4416   true Lsat_1_v8_lg_8: 32464574-32468989 Lactuca sativa
Lsat_1_v5_gn_8_25560 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 32467990-32468989 Lactuca sativa
Lsat_1_v5_gn_8_25560 2.0kb upstream 2.0kb upstream 5416   true Lsat_1_v8_lg_8: 32462574-32467989 Lactuca sativa
Lsat_1_v5_gn_8_25560 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 32462574-32464573 Lactuca sativa
Lsat_1_v5_gn_8_25560 2.0kb downstream 2.0kb downstream 5416   true Lsat_1_v8_lg_8: 32464574-32469989 Lactuca sativa
Lsat_1_v5_gn_8_25560 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 32467990-32469989 Lactuca sativa
Lsat_1_v5_gn_8_25560 5.0kb upstream 5.0kb upstream 8416   true Lsat_1_v8_lg_8: 32459574-32467989 Lactuca sativa
Lsat_1_v5_gn_8_25560 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 32459574-32464573 Lactuca sativa
Lsat_1_v5_gn_8_25560 5.0kb downstream 5.0kb downstream 8416   true Lsat_1_v8_lg_8: 32464574-32472989 Lactuca sativa
Lsat_1_v5_gn_8_25560 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 32467990-32472989 Lactuca sativa
Lsat_1_v5_gn_8_25560 10.0kb upstream 10.0kb upstream 13416   true Lsat_1_v8_lg_8: 32454574-32467989 Lactuca sativa
Lsat_1_v5_gn_8_25560 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 32454574-32464573 Lactuca sativa
Lsat_1_v5_gn_8_25560 10.0kb downstream 10.0kb downstream 13416   true Lsat_1_v8_lg_8: 32464574-32477989 Lactuca sativa
Lsat_1_v5_gn_8_25560 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 32467990-32477989 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026464 5273 Angiosperm View MSA
121472538 5263 Asterids View MSA
123739584 5271 Pentapetalae View MSA
122791815 5272 Eudicot View MSA
121346138 5274 Embryophyte View MSA
123424452 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain