Gene : Lsat_1_v5_gn_8_65441 L. sativa V8
Defline:  (1 of 1) PTHR12818//PTHR12818:SF0 - UNCHARACTERIZED // NEF-ASSOCIATED PROTEIN 1 Genomic Order:  2034
Name:  ? Lsat_1_v5_gn_8_65441 Secondary Identifier:  ? PAC:38953978
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_65441 0.5kb upstream 0.5kb upstream 3307   true Lsat_1_v8_lg_8: 93881773-93885079 Lactuca sativa
Lsat_1_v5_gn_8_65441 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 93881773-93882272 Lactuca sativa
Lsat_1_v5_gn_8_65441 0.5kb downstream 0.5kb downstream 3307   true Lsat_1_v8_lg_8: 93882273-93885579 Lactuca sativa
Lsat_1_v5_gn_8_65441 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 93885080-93885579 Lactuca sativa
Lsat_1_v5_gn_8_65441 1.0kb upstream 1.0kb upstream 3807   true Lsat_1_v8_lg_8: 93881273-93885079 Lactuca sativa
Lsat_1_v5_gn_8_65441 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 93881273-93882272 Lactuca sativa
Lsat_1_v5_gn_8_65441 1.0kb downstream 1.0kb downstream 3807   true Lsat_1_v8_lg_8: 93882273-93886079 Lactuca sativa
Lsat_1_v5_gn_8_65441 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 93885080-93886079 Lactuca sativa
Lsat_1_v5_gn_8_65441 2.0kb upstream 2.0kb upstream 4807   true Lsat_1_v8_lg_8: 93880273-93885079 Lactuca sativa
Lsat_1_v5_gn_8_65441 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 93880273-93882272 Lactuca sativa
Lsat_1_v5_gn_8_65441 2.0kb downstream 2.0kb downstream 4807   true Lsat_1_v8_lg_8: 93882273-93887079 Lactuca sativa
Lsat_1_v5_gn_8_65441 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 93885080-93887079 Lactuca sativa
Lsat_1_v5_gn_8_65441 5.0kb upstream 5.0kb upstream 7807   true Lsat_1_v8_lg_8: 93877273-93885079 Lactuca sativa
Lsat_1_v5_gn_8_65441 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 93877273-93882272 Lactuca sativa
Lsat_1_v5_gn_8_65441 5.0kb downstream 5.0kb downstream 7807   true Lsat_1_v8_lg_8: 93882273-93890079 Lactuca sativa
Lsat_1_v5_gn_8_65441 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 93885080-93890079 Lactuca sativa
Lsat_1_v5_gn_8_65441 10.0kb upstream 10.0kb upstream 12807   true Lsat_1_v8_lg_8: 93872273-93885079 Lactuca sativa
Lsat_1_v5_gn_8_65441 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 93872273-93882272 Lactuca sativa
Lsat_1_v5_gn_8_65441 10.0kb downstream 10.0kb downstream 12807   true Lsat_1_v8_lg_8: 93882273-93895079 Lactuca sativa
Lsat_1_v5_gn_8_65441 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 93885080-93895079 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467419 5263 Asterids View MSA
123737004 5271 Pentapetalae View MSA
122788525 5272 Eudicot View MSA
122041749 5273 Angiosperm View MSA
121344113 5274 Embryophyte View MSA
123423900 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain