Gene : Lsat_1_v5_gn_8_6800 L. sativa V8
Defline:  (1 of 2) PTHR10015//PTHR10015:SF168 - HEAT SHOCK TRANSCRIPTION FACTOR // HEAT STRESS TRANSCRIPTION FACTOR B-2A Genomic Order:  227
Name:  ? Lsat_1_v5_gn_8_6800 Secondary Identifier:  ? PAC:38949986
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_6800 0.5kb upstream 0.5kb upstream 2209   true Lsat_1_v8_lg_8: 8652854-8655062 Lactuca sativa
Lsat_1_v5_gn_8_6800 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 8652854-8653353 Lactuca sativa
Lsat_1_v5_gn_8_6800 0.5kb downstream 0.5kb downstream 2209   true Lsat_1_v8_lg_8: 8653354-8655562 Lactuca sativa
Lsat_1_v5_gn_8_6800 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 8655063-8655562 Lactuca sativa
Lsat_1_v5_gn_8_6800 1.0kb upstream 1.0kb upstream 2709   true Lsat_1_v8_lg_8: 8652354-8655062 Lactuca sativa
Lsat_1_v5_gn_8_6800 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 8652354-8653353 Lactuca sativa
Lsat_1_v5_gn_8_6800 1.0kb downstream 1.0kb downstream 2709   true Lsat_1_v8_lg_8: 8653354-8656062 Lactuca sativa
Lsat_1_v5_gn_8_6800 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 8655063-8656062 Lactuca sativa
Lsat_1_v5_gn_8_6800 2.0kb upstream 2.0kb upstream 3709   true Lsat_1_v8_lg_8: 8651354-8655062 Lactuca sativa
Lsat_1_v5_gn_8_6800 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 8651354-8653353 Lactuca sativa
Lsat_1_v5_gn_8_6800 2.0kb downstream 2.0kb downstream 3709   true Lsat_1_v8_lg_8: 8653354-8657062 Lactuca sativa
Lsat_1_v5_gn_8_6800 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 8655063-8657062 Lactuca sativa
Lsat_1_v5_gn_8_6800 5.0kb upstream 5.0kb upstream 6709   true Lsat_1_v8_lg_8: 8648354-8655062 Lactuca sativa
Lsat_1_v5_gn_8_6800 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 8648354-8653353 Lactuca sativa
Lsat_1_v5_gn_8_6800 5.0kb downstream 5.0kb downstream 6709   true Lsat_1_v8_lg_8: 8653354-8660062 Lactuca sativa
Lsat_1_v5_gn_8_6800 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 8655063-8660062 Lactuca sativa
Lsat_1_v5_gn_8_6800 10.0kb upstream 10.0kb upstream 11709   true Lsat_1_v8_lg_8: 8643354-8655062 Lactuca sativa
Lsat_1_v5_gn_8_6800 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 8643354-8653353 Lactuca sativa
Lsat_1_v5_gn_8_6800 10.0kb downstream 10.0kb downstream 11709   true Lsat_1_v8_lg_8: 8653354-8665062 Lactuca sativa
Lsat_1_v5_gn_8_6800 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 8655063-8665062 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481443 5263 Asterids View MSA
123750823 5271 Pentapetalae View MSA
122797389 5272 Eudicot View MSA
122047819 5273 Angiosperm View MSA
121349623 5274 Embryophyte View MSA
123428852 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain