Gene : Lsat_1_v5_gn_8_69161 L. sativa V8
Defline:  (1 of 138) PF00010 - Helix-loop-helix DNA-binding domain (HLH) Genomic Order:  2151
Name:  ? Lsat_1_v5_gn_8_69161 Secondary Identifier:  ? PAC:38951302
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_69161 0.5kb upstream 0.5kb upstream 5910   true Lsat_1_v8_lg_8: 101371614-101377523 Lactuca sativa
Lsat_1_v5_gn_8_69161 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 101371614-101372113 Lactuca sativa
Lsat_1_v5_gn_8_69161 0.5kb downstream 0.5kb downstream 5910   true Lsat_1_v8_lg_8: 101372114-101378023 Lactuca sativa
Lsat_1_v5_gn_8_69161 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 101377524-101378023 Lactuca sativa
Lsat_1_v5_gn_8_69161 1.0kb upstream 1.0kb upstream 6410   true Lsat_1_v8_lg_8: 101371114-101377523 Lactuca sativa
Lsat_1_v5_gn_8_69161 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 101371114-101372113 Lactuca sativa
Lsat_1_v5_gn_8_69161 1.0kb downstream 1.0kb downstream 6410   true Lsat_1_v8_lg_8: 101372114-101378523 Lactuca sativa
Lsat_1_v5_gn_8_69161 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 101377524-101378523 Lactuca sativa
Lsat_1_v5_gn_8_69161 2.0kb upstream 2.0kb upstream 7410   true Lsat_1_v8_lg_8: 101370114-101377523 Lactuca sativa
Lsat_1_v5_gn_8_69161 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 101370114-101372113 Lactuca sativa
Lsat_1_v5_gn_8_69161 2.0kb downstream 2.0kb downstream 7410   true Lsat_1_v8_lg_8: 101372114-101379523 Lactuca sativa
Lsat_1_v5_gn_8_69161 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 101377524-101379523 Lactuca sativa
Lsat_1_v5_gn_8_69161 5.0kb upstream 5.0kb upstream 10410   true Lsat_1_v8_lg_8: 101367114-101377523 Lactuca sativa
Lsat_1_v5_gn_8_69161 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 101367114-101372113 Lactuca sativa
Lsat_1_v5_gn_8_69161 5.0kb downstream 5.0kb downstream 10410   true Lsat_1_v8_lg_8: 101372114-101382523 Lactuca sativa
Lsat_1_v5_gn_8_69161 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 101377524-101382523 Lactuca sativa
Lsat_1_v5_gn_8_69161 10.0kb upstream 10.0kb upstream 15410   true Lsat_1_v8_lg_8: 101362114-101377523 Lactuca sativa
Lsat_1_v5_gn_8_69161 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 101362114-101372113 Lactuca sativa
Lsat_1_v5_gn_8_69161 10.0kb downstream 10.0kb downstream 15410   true Lsat_1_v8_lg_8: 101372114-101387523 Lactuca sativa
Lsat_1_v5_gn_8_69161 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 101377524-101387523 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473720 5263 Asterids View MSA
123740187 5271 Pentapetalae View MSA
122797618 5272 Eudicot View MSA
122050016 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain