Gene : Lsat_1_v5_gn_8_70480 L. sativa V8
Defline:  (1 of 1) PTHR15319:SF1 - TATA BOX-BINDING PROTEIN-ASSOCIATED FACTOR RNA POLYMERASE I SUBUNIT C Genomic Order:  2206
Name:  ? Lsat_1_v5_gn_8_70480 Secondary Identifier:  ? PAC:38954345
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_8_70480 0.5kb upstream 0.5kb upstream 4420   true Lsat_1_v8_lg_8: 104076524-104080943 Lactuca sativa
Lsat_1_v5_gn_8_70480 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_8: 104076524-104077023 Lactuca sativa
Lsat_1_v5_gn_8_70480 0.5kb downstream 0.5kb downstream 4420   true Lsat_1_v8_lg_8: 104077024-104081443 Lactuca sativa
Lsat_1_v5_gn_8_70480 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_8: 104080944-104081443 Lactuca sativa
Lsat_1_v5_gn_8_70480 1.0kb upstream 1.0kb upstream 4920   true Lsat_1_v8_lg_8: 104076024-104080943 Lactuca sativa
Lsat_1_v5_gn_8_70480 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_8: 104076024-104077023 Lactuca sativa
Lsat_1_v5_gn_8_70480 1.0kb downstream 1.0kb downstream 4920   true Lsat_1_v8_lg_8: 104077024-104081943 Lactuca sativa
Lsat_1_v5_gn_8_70480 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_8: 104080944-104081943 Lactuca sativa
Lsat_1_v5_gn_8_70480 2.0kb upstream 2.0kb upstream 5920   true Lsat_1_v8_lg_8: 104075024-104080943 Lactuca sativa
Lsat_1_v5_gn_8_70480 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_8: 104075024-104077023 Lactuca sativa
Lsat_1_v5_gn_8_70480 2.0kb downstream 2.0kb downstream 5920   true Lsat_1_v8_lg_8: 104077024-104082943 Lactuca sativa
Lsat_1_v5_gn_8_70480 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_8: 104080944-104082943 Lactuca sativa
Lsat_1_v5_gn_8_70480 5.0kb upstream 5.0kb upstream 8920   true Lsat_1_v8_lg_8: 104072024-104080943 Lactuca sativa
Lsat_1_v5_gn_8_70480 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_8: 104072024-104077023 Lactuca sativa
Lsat_1_v5_gn_8_70480 5.0kb downstream 5.0kb downstream 8920   true Lsat_1_v8_lg_8: 104077024-104085943 Lactuca sativa
Lsat_1_v5_gn_8_70480 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_8: 104080944-104085943 Lactuca sativa
Lsat_1_v5_gn_8_70480 10.0kb upstream 10.0kb upstream 13920   true Lsat_1_v8_lg_8: 104067024-104080943 Lactuca sativa
Lsat_1_v5_gn_8_70480 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_8: 104067024-104077023 Lactuca sativa
Lsat_1_v5_gn_8_70480 10.0kb downstream 10.0kb downstream 13920   true Lsat_1_v8_lg_8: 104077024-104090943 Lactuca sativa
Lsat_1_v5_gn_8_70480 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_8: 104080944-104090943 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474629 5263 Asterids View MSA
123740650 5271 Pentapetalae View MSA
122790437 5272 Eudicot View MSA
122049864 5273 Angiosperm View MSA
121348970 5274 Embryophyte View MSA
123381106 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain